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BaseInfo

ncRNA ID novel_zma_miR492
Species Zea mays
Class miRNA
Genome position Chr7:107634695-107634785 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711;SRR2287160;SRR2287161;SRR5451004;SRR2089700;SRR2089701;SRR2089703;SRR2089704;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - ACGGCCAAAGCCGUCGGACGUAAG - 24
Stem-loop(if miRNA) --      -                A  AU   -A  U         
  ACGGCC AAAGCCGUCGGACGUA GG  UGA  CC UCGGAGAUAA
  |||||| |||||||||||||||| ||  |||  || |||||||||C
  UGCCGG UUUUGGCAGCUUGUAU CC  ACU  GG AGUCUCUAUC
GC      A                C  --   AC  C         
Stem-loop sequence ACGGCCAAAGCCGUCGGACGUAAGGAUUGAACCUUCGGAGAUAACCUAUCUCUGACGGCAUCACCCUAUGUUCGACGGUUUUAGGCCGUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646240.2
ncRNA:24   GAAUGCAGGCUGCCGAAACCGGCA   1
  ||||=|||||||||||||||||||
targets:1513   CUUAUGUCCGACGGCUUUGGCCGU   1536

0.0 PREDICTED: Zea mays transcription factor MYB122 (LOC541755), transcript variant X2, mRNA NA coding protein psRNATarget