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BaseInfo

ncRNA ID novel_zma_miR486
Species Zea mays
Class miRNA
Genome position Chr7:88681955-88682082 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR2089715;SRR2287031;SRR2287159;SRR2287162;SRR1618882;SRR2287165;SRR1618883;SRR5099742;SRR1997865;SRR5105959;SRR5105961;SRR2089699;SRR2089700;SRR2089704;SRR2089706;SRR2089707;SRR2089708
Length 21
Mature sequence(if miRNA) 1 - UCAGAAAAUAUGAACUUGAGA - 21
Stem-loop(if miRNA) --UC              UG              CAUA             G         AUU
    AGAAAAUAUGAACU  AGAUUCAACUUUUA    GAGAAAUAAAAGA ACAAAUCUU   A
    ||||||||||||||  ||||||||||||||    ||||||||||||| |||||||||
    UCUUUUAUACUUGA  UUUAAGUUGAAAAU    CUCUUUGUUUUUU UGUUUAGAG   G
GGAA              GU              ACGC             A         AGA
Stem-loop sequence UCAGAAAAUAUGAACUUGAGAUUCAACUUUUACAUAGAGAAAUAAAAGAGACAAAUCUUAUUAGAGAGAGAUUUGUAUUUUUUGUUUCUCCGCAUAAAAGUUGAAUUUUGAGUUCAUAUUUUCUAAGG