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BaseInfo

ncRNA ID	novel_zma_miR480
Species	Zea mays
Class	miRNA
Genome position	Chr7:1097439-1097520 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089711;SRR2089712
Length	24
Mature sequence(if miRNA)	1 - AACUAAAAAGAAACGGAGGGAACA - 24
Stem-loop(if miRNA)	--C    C       G     U               GUAA    UCUC CCGUUUC UUUUA UUGUUGCUGGAUAGU    A    |||| ||||||| ||||| |||||||||||||||    AGGG GGCAAAG AAAAU AACAGCGACCUAUCA    A ACA    A       A     C               AGUU
Stem-loop sequence	CUCUCCCCGUUUCGUUUUAUUUGUUGCUGGAUAGUGUAAAAUUGAACUAUCCAGCGACAACUAAAAAGAAACGGAGGGAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ239400.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||||| targets:4   UGUACUCCCUCCGUUUCUUUUUAGUU   29 Target Full Sequence	0.0	Sequence 5395 from Patent EP2985353	NA	coding protein	psRNATarget
JB167731.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||||| targets:4   UGUACUCCCUCCGUUUCUUUUUAGUU   29 Target Full Sequence	0.0	Sequence 5395 from Patent EP2559767	NA	coding protein	psRNATarget
HI407270.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||||| targets:4   UGUACUCCCUCCGUUUCUUUUUAGUU   29 Target Full Sequence	0.0	Sequence 5395 from Patent EP2074227	NA	coding protein	psRNATarget
EZ112557.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||||| targets:46   GGUACUCCCUCCGUUUCUUUUUAGUU   71 Target Full Sequence	0.0	TSA: Zea mays contig48218, mRNA sequence	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:24   ACAA-------GGGAGGCAAAGAAAAAUCAA   1   ||||-------|||||||||||||||||||| targets:1144   UGUUGGAUACUCCCUCCGUUUCUUUUUAGUU   1174 Target Full Sequence	0.0	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008677351.2	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||||| targets:2055   GGUACUCCCUCCGUUUCUUUUUAGUU   2080 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA	NA	coding protein	psRNATarget
LQ235417.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:11   UACUCCCUCCGUUUCUUUUUAGUU   34 Target Full Sequence	0.0	Sequence 1412 from Patent EP2985353	NA	coding protein	psRNATarget
JB163748.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:11   UACUCCCUCCGUUUCUUUUUAGUU   34 Target Full Sequence	0.0	Sequence 1412 from Patent EP2559767	NA	coding protein	psRNATarget
HI403287.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:11   UACUCCCUCCGUUUCUUUUUAGUU   34 Target Full Sequence	0.0	Sequence 1412 from Patent EP2074227	NA	coding protein	psRNATarget
HI403399.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:11   UACUCCCUCCGUUUCUUUUUAGUU   34 Target Full Sequence	0.0	Sequence 1524 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235529.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:11   UACUCCCUCCGUUUCUUUUUAGUU   34 Target Full Sequence	0.0	Sequence 1524 from Patent EP2985353	NA	coding protein	psRNATarget
JB163860.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:11   UACUCCCUCCGUUUCUUUUUAGUU   34 Target Full Sequence	0.0	Sequence 1524 from Patent EP2559767	NA	coding protein	psRNATarget
BT062074.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1137   UACUCCCUCCGUUUCUUUUUAGUU   1160 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds	NA	coding protein	psRNATarget
EU953599.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1225   UACUCCCUCCGUUUCUUUUUAGUU   1248 Target Full Sequence	0.0	Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682276.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1220   UACUCCCUCCGUUUCUUUUUAGUU   1243 Target Full Sequence	0.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU973774.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1235   UACUCCCUCCGUUUCUUUUUAGUU   1258 Target Full Sequence	0.0	Zea mays clone 410704 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682289.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1249   UACUCCCUCCGUUUCUUUUUAGUU   1272 Target Full Sequence	0.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA	NA	coding protein	psRNATarget
NM_001158647.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1301   UACUCCCUCCGUUUCUUUUUAGUU   1324 Target Full Sequence	0.0	Zea mays F-box domain containing protein (LOC100285757), mRNA	NA	coding protein	psRNATarget
EU973763.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1303   UACUCCCUCCGUUUCUUUUUAGUU   1326 Target Full Sequence	0.0	Zea mays clone 409560 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682282.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1409   UACUCCCUCCGUUUCUUUUUAGUU   1432 Target Full Sequence	0.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020553332.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1998   UACUCCCUCCGUUUCUUUUUAGUU   2021 Target Full Sequence	0.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020553342.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2029   UACUCCCUCCGUUUCUUUUUAGUU   2052 Target Full Sequence	0.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020553327.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2111   UACUCCCUCCGUUUCUUUUUAGUU   2134 Target Full Sequence	0.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553339.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2142   UACUCCCUCCGUUUCUUUUUAGUU   2165 Target Full Sequence	0.0	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020537567.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:1452   UACUCCCUCCGUUUCUUUUUAGUU   1475 Target Full Sequence	0.0	PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546695.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2205   UACUCCCUCCGUUUCUUUUUAGUU   2228 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA	NA	coding protein	psRNATarget
XM_008666445.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2205   UACUCCCUCCGUUUCUUUUUAGUU   2228 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA	NA	coding protein	psRNATarget
XM_020546694.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2205   UACUCCCUCCGUUUCUUUUUAGUU   2228 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA	NA	coding protein	psRNATarget
XM_020546685.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2226   UACUCCCUCCGUUUCUUUUUAGUU   2249 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546687.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2226   UACUCCCUCCGUUUCUUUUUAGUU   2249 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020546686.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2226   UACUCCCUCCGUUUCUUUUUAGUU   2249 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546691.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2205   UACUCCCUCCGUUUCUUUUUAGUU   2228 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020546689.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2164   UACUCCCUCCGUUUCUUUUUAGUU   2187 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020546683.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2219   UACUCCCUCCGUUUCUUUUUAGUU   2242 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546684.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2244   UACUCCCUCCGUUUCUUUUUAGUU   2267 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546692.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2205   UACUCCCUCCGUUUCUUUUUAGUU   2228 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_020546693.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||||| targets:2143   UACUCCCUCCGUUUCUUUUUAGUU   2166 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA	NA	coding protein	psRNATarget
HI410196.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||*|| targets:2   UGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 8321 from Patent EP2074227	NA	coding protein	psRNATarget
JB169171.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||*|| targets:2   UGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6835 from Patent EP2559767	NA	coding protein	psRNATarget
HI408710.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||*|| targets:2   UGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6835 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242326.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||*|| targets:2   UGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 8321 from Patent EP2985353	NA	coding protein	psRNATarget
JB170657.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||*|| targets:2   UGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 8321 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240840.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||||||||*|| targets:2   UGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6835 from Patent EP2985353	NA	coding protein	psRNATarget
JB167672.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||*|||||||| targets:4   UGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5336 from Patent EP2559767	NA	coding protein	psRNATarget
HI407211.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||*|||||||| targets:4   UGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5336 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239341.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||*|||||||| targets:4   UGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5336 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020549872.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||*|||||||| targets:1263   UGUACUCCCUCCGUUUCGUUUUAGUU   1288 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT065656.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||*|||||||| targets:1430   UGUACUCCCUCCGUUUCGUUUUAGUU   1455 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175582.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||||||||*|||||||| targets:1430   UGUACUCCCUCCGUUUCGUUUUAGUU   1455 Target Full Sequence	1.5	Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA	NA	coding protein	psRNATarget
NM_001352327.1	ncRNA:24   ACA-----AGGGAGGCAAAGAAAAAUCAA   1   |||-----|||=||=|||||||||||||| targets:2664   UGUAGUACUCCUUCUGUUUCUUUUUAGUU   2692 Target Full Sequence	2.0	Zea mays delta-1-pyrroline-5-carboxylate synthase-like (LOC103630430), mRNA	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:24   ACAA---GGGAGGCAAAGAAAAAUCAA   1   ||||---|||||||||||||||||*|| targets:1   UGUUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
JB170160.1	ncRNA:24   ACAA---GGGAGGCAAAGAAAAAUCAA   1   ||||---|||||||||||||||||*|| targets:1   UGUUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
HI409699.1	ncRNA:24   ACAA---GGGAGGCAAAGAAAAAUCAA   1   ||||---|||||||||||||||||*|| targets:1   UGUUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||=|||||||||||*|| targets:2   UGUACUCCCUCUGUUUCUUUUUAUUU   27 Target Full Sequence	2.5	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
HI410015.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||=|||||||||||*|| targets:2   UGUACUCCCUCUGUUUCUUUUUAUUU   27 Target Full Sequence	2.5	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
JB170476.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||=|||||||||||*|| targets:2   UGUACUCCCUCUGUUUCUUUUUAUUU   27 Target Full Sequence	2.5	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
JB163862.1	ncRNA:24   ACA-----AGGGAGGCAAAGAAAAAUCAA   1   |||-----||||||||||||||||||*|| targets:6   UGUAUUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1526 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235531.1	ncRNA:24   ACA-----AGGGAGGCAAAGAAAAAUCAA   1   |||-----||||||||||||||||||*|| targets:6   UGUAUUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1526 from Patent EP2985353	NA	coding protein	psRNATarget
HI403401.1	ncRNA:24   ACA-----AGGGAGGCAAAGAAAAAUCAA   1   |||-----||||||||||||||||||*|| targets:6   UGUAUUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1526 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001149050.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||=*||||||||||||| targets:459   UGUACUCCCUCUAUUUCUUUUUAGUU   484 Target Full Sequence	2.0	Zea mays hypothetical protein (LOC100274760), mRNA	NA	coding protein	psRNATarget
EU952581.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   |||--||||||=*||||||||||||| targets:459   UGUACUCCCUCUAUUUCUUUUUAGUU   484 Target Full Sequence	2.0	Zea mays clone 1283791 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
JB166319.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |*||||=|||*||||||||||||| targets:8   UAUUCCUUCCAUUUCUUUUUAGUU   31 Target Full Sequence	2.0	Sequence 3983 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237988.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |*||||=|||*||||||||||||| targets:8   UAUUCCUUCCAUUUCUUUUUAGUU   31 Target Full Sequence	2.0	Sequence 3983 from Patent EP2985353	NA	coding protein	psRNATarget
HI405858.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |*||||=|||*||||||||||||| targets:8   UAUUCCUUCCAUUUCUUUUUAGUU   31 Target Full Sequence	2.0	Sequence 3983 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001153573.1	ncRNA:24   ACA------AGGGAGGCAAAGAAAAAUCAA   1   |||------||=||==|||||||||||||| targets:1140   UGUAAUUACUCUCUUUGUUUCUUUUUAGUU   1169 Target Full Sequence	3.0	Zea mays protein binding protein (LOC100280655), mRNA	NA	coding protein	psRNATarget
EU953133.1	ncRNA:24   ACA------AGGGAGGCAAAGAAAAAUCAA   1   |||------||=||==|||||||||||||| targets:1140   UGUAAUUACUCUCUUUGUUUCUUUUUAGUU   1169 Target Full Sequence	3.0	Zea mays clone 1385620 protein binding protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001305845.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |*||||=|||*||||||||||||| targets:2220   UAUUCCUUCCAUUUCUUUUUAGUU   2243 Target Full Sequence	2.0	Zea mays uncharacterized LOC542022 (LOC542022), mRNA	NA	coding protein	psRNATarget
JB169695.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:1   GGUACUCCCUCCGUUUCGUUUUAGUU   26 Target Full Sequence	1.5	Sequence 7359 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241364.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:1   GGUACUCCCUCCGUUUCGUUUUAGUU   26 Target Full Sequence	1.5	Sequence 7359 from Patent EP2985353	NA	coding protein	psRNATarget
HI409234.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:1   GGUACUCCCUCCGUUUCGUUUUAGUU   26 Target Full Sequence	1.5	Sequence 7359 from Patent EP2074227	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:2   AGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:2   AGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:2   AGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:2   AGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:2   AGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:2   AGUACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
HI407269.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:4   GGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5394 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239399.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:4   GGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5394 from Patent EP2985353	NA	coding protein	psRNATarget
JB167730.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:4   GGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5394 from Patent EP2559767	NA	coding protein	psRNATarget
JB167691.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:4   AGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
HI407230.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:4   AGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:4   AGUACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
JB163740.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:9   AGUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1404 from Patent EP2559767	NA	coding protein	psRNATarget
HI403279.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:9   AGUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1404 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235486.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:9   CGUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1481 from Patent EP2985353	NA	coding protein	psRNATarget
HI403356.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:9   CGUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1481 from Patent EP2074227	NA	coding protein	psRNATarget
JB163817.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:9   CGUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1481 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235409.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:9   AGUACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1404 from Patent EP2985353	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:495   AGUACUCCCUCCGUUUCUUUUUAUUU   520 Target Full Sequence	1.5	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:567   AGUACUCCCUCCGUUUCUUUUUAUUU   592 Target Full Sequence	1.5	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||||||||*|| targets:567   AGUACUCCCUCCGUUUCUUUUUAUUU   592 Target Full Sequence	1.5	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153043.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:833   GGUACUCCCUCCGUUUCGUUUUAGUU   858 Target Full Sequence	1.5	Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA	NA	coding protein	psRNATarget
BT055583.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:833   GGUACUCCCUCCGUUUCGUUUUAGUU   858 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds	NA	coding protein	psRNATarget
EU976025.1	ncRNA:24   ACA-------AGGGAGGCAAAGAAAAAUCAA   1   |||-------|===||||||||||||||||| targets:821   UGUAUAUUACUUUUUCCGUUUCUUUUUAGUU   851 Target Full Sequence	2.0	Zea mays clone 508899 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152046.1	ncRNA:24   ACA-------AGGGAGGCAAAGAAAAAUCAA   1   |||-------|===||||||||||||||||| targets:821   UGUAUAUUACUUUUUCCGUUUCUUUUUAGUU   851 Target Full Sequence	2.0	Zea mays uncharacterized LOC100278927 (LOC100278927), mRNA	NA	coding protein	psRNATarget
EU971616.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||||||||||||*|||||||| targets:1160   GGUACUCCCUCCGUUUCGUUUUAGUU   1185 Target Full Sequence	1.5	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008679695.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   **|||=|||||||||||||||*|| targets:257   CUUUCUCUCCGUUUCUUUUUAAUU   280 Target Full Sequence	2.5	PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020552423.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   **|||=|||||||||||||||*|| targets:256   CUUUCUCUCCGUUUCUUUUUAAUU   279 Target Full Sequence	2.5	PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X5, mRNA	NA	coding protein	psRNATarget
EU968044.1	ncRNA:24   ACA--------AGGGAGGCAAAGAAAAAUCAA   1   |||--------||||||||||||*|||||||| targets:1016   UGUAUAUAUACUCCCUCCGUUUCGUUUUAGUU   1047 Target Full Sequence	1.5	Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds	NA	coding protein	psRNATarget
BT035546.1	ncRNA:24   ACA--------AGGGAGGCAAAGAAAAAUCAA   1   |||--------||||||||||||*|||||||| targets:904   UGUAUAUAUACUCCCUCCGUUUCGUUUUAGUU   935 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds	NA	coding protein	psRNATarget
BT067066.1	ncRNA:24   ACAA---GGGAGGCAAAGAAAAAUCAA   1   *|||---|||||||||||||||*|||| targets:416   AGUUACUCCCUCCGUUUCUUUUAAGUU   442 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0180L06 mRNA, complete cds	NA	coding protein	psRNATarget
HI406357.1	ncRNA:21   AGGGAGGCAAAGAAAAAUCAA   1   |==|||=|||||||||||||| targets:1   UUUCUCUGUUUCUUUUUAGUU   21 Target Full Sequence	2.0	Sequence 4482 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238487.1	ncRNA:21   AGGGAGGCAAAGAAAAAUCAA   1   |==|||=|||||||||||||| targets:1   UUUCUCUGUUUCUUUUUAGUU   21 Target Full Sequence	2.0	Sequence 4482 from Patent EP2985353	NA	coding protein	psRNATarget
JB166818.1	ncRNA:21   AGGGAGGCAAAGAAAAAUCAA   1   |==|||=|||||||||||||| targets:1   UUUCUCUGUUUCUUUUUAGUU   21 Target Full Sequence	2.0	Sequence 4482 from Patent EP2559767	NA	coding protein	psRNATarget
HI409615.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7740 from Patent EP2074227	NA	coding protein	psRNATarget
JB170076.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7740 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241745.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7740 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241458.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7453 from Patent EP2985353	NA	coding protein	psRNATarget
HI409328.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7453 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240700.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6695 from Patent EP2985353	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241746.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7741 from Patent EP2985353	NA	coding protein	psRNATarget
HI409616.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7741 from Patent EP2074227	NA	coding protein	psRNATarget
HI408570.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6695 from Patent EP2074227	NA	coding protein	psRNATarget
JB169789.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7453 from Patent EP2559767	NA	coding protein	psRNATarget
JB169031.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6695 from Patent EP2559767	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
JB170077.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:4   UACUCCCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	1.5	Sequence 7741 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239454.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:6   UACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5449 from Patent EP2985353	NA	coding protein	psRNATarget
JB167785.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:6   UACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5449 from Patent EP2559767	NA	coding protein	psRNATarget
HI407324.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:6   UACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5449 from Patent EP2074227	NA	coding protein	psRNATarget
JB167766.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:6   UACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5430 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239435.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:6   UACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5430 from Patent EP2985353	NA	coding protein	psRNATarget
HI407305.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:6   UACUCCCUCCGUUUCGUUUUAGUU   29 Target Full Sequence	1.5	Sequence 5430 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235424.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:11   UACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1419 from Patent EP2985353	NA	coding protein	psRNATarget
JB163755.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:11   UACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1419 from Patent EP2559767	NA	coding protein	psRNATarget
HI403294.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:11   UACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1419 from Patent EP2074227	NA	coding protein	psRNATarget
HI403369.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:11   UACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1494 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235499.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:11   UACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1494 from Patent EP2985353	NA	coding protein	psRNATarget
JB163830.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:11   UACUCCCUCCGUUUCUUUUUAUUU   34 Target Full Sequence	1.5	Sequence 1494 from Patent EP2559767	NA	coding protein	psRNATarget
BT062468.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:571   UACUCCCUCCGUUUCGUUUUAGUU   594 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds	NA	coding protein	psRNATarget
EU952378.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|||||||||||*||||||||| targets:713   UACUCCCUCCGUUUAUUUUUAGUU   736 Target Full Sequence	1.5	Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:230   UACUCCCUCCGUUUCUUUUUAUUU   253 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
BT065083.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|||||||||||||||||||*| targets:206   UCCUCCCUCCGUUUCUUUUUAGAU   229 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0081B22 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:1166   UACUCCCUCCGUUUCUUUUUAUUU   1189 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:1288   UACUCCCUCCGUUUCUUUUUAUUU   1311 Target Full Sequence	1.5	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:1288   UACUCCCUCCGUUUCUUUUUAUUU   1311 Target Full Sequence	1.5	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:141   UACUCCCUCCGUUUCUUUUUAUUU   164 Target Full Sequence	1.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:1272   UACUCCCUCCGUUUCUUUUUAUUU   1295 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001156357.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:1515   UACUCCCUCCGUUUCGUUUUAGUU   1538 Target Full Sequence	1.5	Zea mays Acetylornithine deacetylase (pco121857a), mRNA	NA	coding protein	psRNATarget
EU964807.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||*|||||||| targets:1515   UACUCCCUCCGUUUCGUUUUAGUU   1538 Target Full Sequence	1.5	Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:1527   UACUCCCUCCGUUUCUUUUUAUUU   1550 Target Full Sequence	1.5	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:1543   UACUCCCUCCGUUUCUUUUUAUUU   1566 Target Full Sequence	1.5	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:2435   UACUCCCUCCGUUUCUUUUUAUUU   2458 Target Full Sequence	1.5	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546173.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:1463   UACUCCCUCCGUUUCUUUUUAUUU   1486 Target Full Sequence	1.5	PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:2796   UACUCCCUCCGUUUCUUUUUAUUU   2819 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:2813   UACUCCCUCCGUUUCUUUUUAUUU   2836 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:2919   UACUCCCUCCGUUUCUUUUUAUUU   2942 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||||||||||||||*|| targets:3698   UACUCCCUCCGUUUCUUUUUAUUU   3721 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ097463.1	ncRNA:24   ACA--AGGGAGGCAAAGAAAAAUCAA   1   *||--||=||||||||||*||||||| targets:37   GGUACUCUCUCCGUUUCUAUUUAGUU   62 Target Full Sequence	2.5	TSA: Zea mays contig33118, mRNA sequence	NA	coding protein	psRNATarget
EU957363.1	ncRNA:24   ACAA---GGGAGGCAAAGAAAAAUCAA   1   **||---|=|||=|||||||||||||| targets:464   AUUUACCCUCUCUGUUUCUUUUUAGUU   490 Target Full Sequence	2.0	Zea mays clone 1589847 mRNA sequence	NA	coding protein	psRNATarget
LQ242181.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|||||=||||||*|||||||| targets:1   UACUCCCUUCGUUUCGUUUUAGUU   24 Target Full Sequence	2.5	Sequence 8176 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241224.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||=|||||||||||*|| targets:1   UACUCCCUCUGUUUCUUUUUAUUU   24 Target Full Sequence	2.5	Sequence 7219 from Patent EP2985353	NA	coding protein	psRNATarget
HI409094.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||=|||||||||||*|| targets:1   UACUCCCUCUGUUUCUUUUUAUUU   24 Target Full Sequence	2.5	Sequence 7219 from Patent EP2074227	NA	coding protein	psRNATarget
JB169555.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||=|||||||||||*|| targets:1   UACUCCCUCUGUUUCUUUUUAUUU   24 Target Full Sequence	2.5	Sequence 7219 from Patent EP2559767	NA	coding protein	psRNATarget
JB170512.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|||||=||||||*|||||||| targets:1   UACUCCCUUCGUUUCGUUUUAGUU   24 Target Full Sequence	2.5	Sequence 8176 from Patent EP2559767	NA	coding protein	psRNATarget
HI410051.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|||||=||||||*|||||||| targets:1   UACUCCCUUCGUUUCGUUUUAGUU   24 Target Full Sequence	2.5	Sequence 8176 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240984.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||=|||||||||||||||*|| targets:1   UACUCUCUCCGUUUCUUUUUAUUU   24 Target Full Sequence	2.5	Sequence 6979 from Patent EP2985353	NA	coding protein	psRNATarget
HI408854.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||=|||||||||||||||*|| targets:1   UACUCUCUCCGUUUCUUUUUAUUU   24 Target Full Sequence	2.5	Sequence 6979 from Patent EP2074227	NA	coding protein	psRNATarget
JB169315.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||=|||||||||||||||*|| targets:1   UACUCUCUCCGUUUCUUUUUAUUU   24 Target Full Sequence	2.5	Sequence 6979 from Patent EP2559767	NA	coding protein	psRNATarget
JB170060.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||=|||||||||||||||*|| targets:4   UACUCUCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	2.5	Sequence 7724 from Patent EP2559767	NA	coding protein	psRNATarget
HI409599.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||=|||||||||||||||*|| targets:4   UACUCUCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	2.5	Sequence 7724 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241729.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||=|||||||||||||||*|| targets:4   UACUCUCUCCGUUUCUUUUUAUUU   27 Target Full Sequence	2.5	Sequence 7724 from Patent EP2985353	NA	coding protein	psRNATarget
EZ065373.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|||=||||||||*|||||||| targets:278   UACUCCUUCCGUUUCGUUUUAGUU   301 Target Full Sequence	2.5	TSA: Zea mays contig01006, mRNA sequence	NA	coding protein	psRNATarget
BT068381.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||=|||||||||||*|| targets:1109   UACUCCCUCUGUUUCUUUUUAUUU   1132 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds	NA	coding protein	psRNATarget
EU956063.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||=|||||||||||*|| targets:1062   UACUCCCUCUGUUUCUUUUUAUUU   1085 Target Full Sequence	2.5	Zea mays clone 1556707 mRNA sequence	NA	coding protein	psRNATarget
EU973028.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||=|||||||||||*|| targets:1168   UACUCCCUCUGUUUCUUUUUAUUU   1191 Target Full Sequence	2.5	Zea mays clone 391970 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU945792.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|=||||||||||*|||||||| targets:1178   UACUUCCUCCGUUUCGUUUUAGUU   1201 Target Full Sequence	1.5	Zea mays clone 285684 mRNA sequence	NA	coding protein	psRNATarget
BT088158.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**||||||=|||||||||||*|| targets:1202   UACUCCCUCUGUUUCUUUUUAUUU   1225 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds	NA	coding protein	psRNATarget
EU964554.1	ncRNA:24   ACAAGGGAGGCAAAGAAAAAUCAA   1   |**|=||||||||||*|||||||| targets:1327   UACUUCCUCCGUUUCGUUUUAGUU   1350 Target Full Sequence	1.5	Zea mays clone 279840 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget