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BaseInfo

ncRNA ID novel_zma_miR471
Species Zea mays
Class miRNA
Genome position Chr1:13322166-13322323 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR1997865
Length 24
Mature sequence(if miRNA) 135 - GCUAUGGUCAUAGCACUCGGCAAA - 158
Stem-loop(if miRNA) --          CU      C        U      U  CUUU   -GAUUC  A   --UU  U              CAU
  UGCCGAGUGC  UGACCA AGCACUCG CAAAGA GG    ACC      CC GGU    CC UCUUUGCCGAGUGC   C
  ||||||||||  |||||| |||||||| |||||| ||    |||      || |||    || ||||||||||||||
  ACGGCUCACG  ACUGGU UCGUGAGC GUUUCU CC    UGG      GG CCA    GG AGAAACGGCUCACG   G
AA          AU      A        C      U  --UU   ACCCUU  -   UUUC  U              ACU
Stem-loop sequence UGCCGAGUGCCUUGACCACAGCACUCGUCAAAGAUGGCUUUACCGAUUCCCAGGUUUCCUUCUUUGCCGAGUGCCAUCGUCAGCACUCGGCAAAGAUGGCUUUACCGGUUCCCAGGUUUCCUUCUUUGCCGAGUGCUAUGGUCAUAGCACUCGGCAAA