ncRNA ID | novel_zma_miR471 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:13322166-13322323 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 135 - GCUAUGGUCAUAGCACUCGGCAAA - 158 |
Stem-loop(if miRNA) |
--          CU      C        U      U  CUUU   -GAUUC  A   --UU  U              CAU   UGCCGAGUGC  UGACCA AGCACUCG CAAAGA GG    ACC      CC GGU    CC UCUUUGCCGAGUGC   C   ||||||||||  |||||| |||||||| |||||| ||    |||      || |||    || ||||||||||||||   ACGGCUCACG  ACUGGU UCGUGAGC GUUUCU CC    UGG      GG CCA    GG AGAAACGGCUCACG   G AA          AU      A        C      U  --UU   ACCCUU  -   UUUC  U              ACU |
Stem-loop sequence | UGCCGAGUGCCUUGACCACAGCACUCGUCAAAGAUGGCUUUACCGAUUCCCAGGUUUCCUUCUUUGCCGAGUGCCAUCGUCAGCACUCGGCAAAGAUGGCUUUACCGGUUCCCAGGUUUCCUUCUUUGCCGAGUGCUAUGGUCAUAGCACUCGGCAAA |