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BaseInfo

ncRNA ID	novel_zma_miR464
Species	Zea mays
Class	miRNA
Genome position	Chr7:104374849-104374962 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089698;SRR2089699;SRR2089703;SRR2089706;SRR2089707;SRR2089708
Length	21
Mature sequence(if miRNA)	1 - UCUGGAUUGGUCUAAGCGAAC - 21
Stem-loop(if miRNA)	--   G             -AA     A       A             C       U   UCG UUAGACCAAUUCA   GGGGA UUGGAGG GUUUAAAUCCCUG CUAGUCA U   ||| |||||||||||||   ||||| ||||||| ||||||||||||| |||||||   AGC AAUCUGGUUAGGU   CCCCU AACCUCC CAAAUUUAGGGGC GAUCAGU U CA   G             CUA     -       C             A       U
Stem-loop sequence	UCGGUUAGACCAAUUCAAAGGGGAAUUGGAGGAGUUUAAAUCCCUGCCUAGUCAUUUUUGACUAGACGGGGAUUUAAACCCCUCCAAUCCCCAUCUGGAUUGGUCUAAGCGAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020540164.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   ||||||||||||||||||||| targets:1525   GUUCGCUUAGACCAAUCCAGA   1545 Target Full Sequence	0.0	PREDICTED: Zea mays Cysteine-rich repeat secretory protein 3 (LOC107521955), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB169178.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=||||||||||||||| targets:11   GUUCGUUUAGACCAAUCCAGA   31 Target Full Sequence	1.0	Sequence 6842 from Patent EP2559767	NA	coding protein	psRNATarget
HI408717.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=||||||||||||||| targets:11   GUUCGUUUAGACCAAUCCAGA   31 Target Full Sequence	1.0	Sequence 6842 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240847.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=||||||||||||||| targets:11   GUUCGUUUAGACCAAUCCAGA   31 Target Full Sequence	1.0	Sequence 6842 from Patent EP2985353	NA	coding protein	psRNATarget
BT085445.2	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=||||||||||||||| targets:95   GUUCGUUUAGACCAAUCCAGA   115 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0014B16 mRNA, complete cds	NA	coding protein	psRNATarget
BT069310.2	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=||||||||||||||| targets:235   GUUCGUUUAGACCAAUCCAGA   255 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0070M03 mRNA, complete cds	NA	coding protein	psRNATarget
LQ235158.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=|||*||||||||||| targets:5   GUUCGUUUACACCAAUCCAGA   25 Target Full Sequence	2.5	Sequence 1153 from Patent EP2985353	NA	coding protein	psRNATarget
HI403028.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=|||*||||||||||| targets:5   GUUCGUUUACACCAAUCCAGA   25 Target Full Sequence	2.5	Sequence 1153 from Patent EP2074227	NA	coding protein	psRNATarget
JB163489.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||=|||*||||||||||| targets:5   GUUCGUUUACACCAAUCCAGA   25 Target Full Sequence	2.5	Sequence 1153 from Patent EP2559767	NA	coding protein	psRNATarget
EZ095217.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||*|||*||||||||||| targets:42   GUUCGGUUACACCAAUCCAGA   62 Target Full Sequence	2.5	TSA: Zea mays contig30870, mRNA sequence	NA	coding protein	psRNATarget
XM_020542872.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||*|||*||||||||||| targets:1273   GUUCGGUUACACCAAUCCAGA   1293 Target Full Sequence	2.5	PREDICTED: Zea mays LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 (LOC103634808), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT060810.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||*|||*||||||||||| targets:1492   GUUCGGUUACACCAAUCCAGA   1512 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0053C16 mRNA, complete cds	NA	coding protein	psRNATarget
BT042688.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||*|||*||||||||||| targets:1593   GUUCGGUUACACCAAUCCAGA   1613 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0008P01 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148650.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||*|||*||||||||||| targets:1593   GUUCGGUUACACCAAUCCAGA   1613 Target Full Sequence	2.5	Zea mays UDP-glycosyltransferase 75B1 (umc2700), mRNA	NA	coding protein	psRNATarget
EU971133.1	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   |||||*|||*||||||||||| targets:1489   GUUCGGUUACACCAAUCCAGA   1509 Target Full Sequence	2.5	Zea mays clone 358078 mRNA sequence	NA	coding protein	psRNATarget
BT063242.2	ncRNA:21   CAAGCGAAUCUGGUUAGGUCU   1   *||||*|||*||||||||||| targets:480   CUUCGGUUAUACCAAUCCAGA   500 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0042E19 mRNA, complete cds	NA	coding protein	psRNATarget