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BaseInfo

ncRNA ID novel_zma_miR461
Species Zea mays
Class miRNA
Genome position Chr7:24506923-24506981 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089708
Length 22
Mature sequence(if miRNA) 1 - UAUUUCGAAAGGUUUUUGGCUG - 22
Stem-loop(if miRNA) --   UU  -       UU  GC  AG   G
  UAU  CG AAAGGUU  UG  UG  GGC U
  |||  || |||||||  ||  ||  |||
  GUG  GC UUUCCGG  GC  AC  UCG C
UA   GG  C       UU  --  CA   U
Stem-loop sequence UAUUUCGAAAGGUUUUUGGCUGAGGGCGUCUGCUACCACGUUGGCCUUUCCGGGGUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008670637.2
ncRNA:22   GUCGGUUUUUGGAAAGCUUUAU   1
  =||*=|*|||||||||||||||
targets:791   UAGGUAUAAACCUUUCGAAAUA   812

3.0 PREDICTED: Zea mays ABC transporter I family member 1 (LOC103645915), mRNA NA coding protein psRNATarget
BT055738.2
ncRNA:22   GUCGGUUUUUGGAAAGCUUUAU   1
  *|***||||||||||||||||*
targets:942   GAUGAAAAAACCUUUCGAAAUU   963

3.0 Zea mays full-length cDNA clone ZM_BFb0156L24 mRNA, complete cds NA coding protein psRNATarget