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BaseInfo

ncRNA ID	novel_zma_miR454
Species	Zea mays
Class	miRNA
Genome position	Chr7:133632018-133632138 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089712
Length	24
Mature sequence(if miRNA)	1 - UCAAUCCUGGAGAAACGAACGGGC - 24
Stem-loop(if miRNA)	-        -G      C        GCCCU   ------       -----------------    CC   U  CCUGUUCG  UUUCCA GGAUUGGA     GGA      AUAGUUC                 UUAG  AGA U  ||||||||  |||||| ||||||||     |||      |||||||                 ||||  ||| A  GGGCAAGC  AGAGGU CCUAACUU     CCU      UAUCAAG                 AAUC  UCU C C        AA      -        --AAU   AAGCAA       UAGUUUUAAAUAUAUUU    --   U
Stem-loop sequence	CCUGUUCGGUUUCCACGGAUUGGAGCCCUGGAAUAGUUCUUAGCCAGAUUACUUCUCUAAUUUAUAUAAAUUUUGAUGAACUAUAACGAAUCCUAAUUCAAUCCUGGAGAAACGAACGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008674436.2	ncRNA:24   CGGGCAAGCAAAGAGGUCCUAACU   1   ||=|||||||||||*||||||||* targets:1133   GCUCGUUCGUUUCUGCAGGAUUGC   1156 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100278518), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008674435.2	ncRNA:24   CGGGCAAGCAAAGAGGUCCUAACU   1   ||=|||||||||||*||||||||* targets:1258   GCUCGUUCGUUUCUGCAGGAUUGC   1281 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100278518), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008674431.2	ncRNA:24   CGGGCAAGCAAAGAGGUCCUAACU   1   ||=|||||||||||*||||||||* targets:1776   GCUCGUUCGUUUCUGCAGGAUUGC   1799 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100278518), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674432.2	ncRNA:24   CGGGCAAGCAAAGAGGUCCUAACU   1   ||=|||||||||||*||||||||* targets:1779   GCUCGUUCGUUUCUGCAGGAUUGC   1802 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100278518), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674433.2	ncRNA:24   CGGGCAAGCAAAGAGGUCCUAACU   1   ||=|||||||||||*||||||||* targets:1796   GCUCGUUCGUUUCUGCAGGAUUGC   1819 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100278518), transcript variant X3, mRNA	NA	coding protein	psRNATarget