ncRNA ID | novel_zma_miR452 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:148222111-148222185 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089703;SRR2089704;SRR2089705 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGGCGGACUGUCCGCGGCCUAG - 24 |
Stem-loop(if miRNA) |
-G     --           GG   G    -   -    G   GGGCC  GGACGGUCCGC  CCU GUGC GAG GCGC G   |||||  |||||||||||  ||| |||| ||| ||||   UCCGG  CCUGUCAGGCG  GGA CGCG CUC CGUG U GA     CG           --   A    U   U    G |
Stem-loop sequence | GGGGCCGGACGGUCCGCGGCCUGGUGCGAGGCGCGGUGGUGCUCUCUGCGCAAGGGCGGACUGUCCGCGGCCUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001196968.1 |
|
1.5 | Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA | NA | coding protein | psRNATarget | |||||||||
BT088349.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020539115.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA | NA | coding protein | psRNATarget |