ncRNA ID | novel_zma_miR451 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:147319108-147319272 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089714;SRR2089699 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGACGGCCGUAGGAAGUUAGCAU - 24 |
Stem-loop(if miRNA) |
--   AC                    CA              C  -CCUC  C            -U    G   -  -    C   GAG  GGCCGUAGGAAGUUAGCAUG  CAGCUAACUUCCUA GA     CU UAGGAAGUUAGC  UUCA UUG CU CAUC G   |||  ||||||||||||||||||||  |||||||||||||| ||     || ||||||||||||  |||| ||| || ||||   CUC  CCGGCAUCCUUCAAUCGUAC  GUCGAUUGAAGGAU CU     GG GUUCUUCAAUCG  GAGU AAC GG GUGG U AU   CU                    AC              -  CCGCC  C            CC    A   U  C    G |
Stem-loop sequence | GAGACGGCCGUAGGAAGUUAGCAUGCACAGCUAACUUCCUACGACCUCCUCUAGGAAGUUAGCUUUCAGUUGCUCAUCCGUGGGUGCGGUCAAAUGAGCCGCUAACUUCUUGCGGCCGCCUCUAGGAAGUUAGCUGCACAUGCUAACUUCCUACGGCCUCCUCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT086229.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds | NA | coding protein | psRNATarget |