ncRNA ID | osa-miR160d-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:32454988-32455129 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 119 - GCGUGCGAGGAGCCAAGCAUG - 139 |
Stem-loop(if miRNA) |
GG  A     C       C         CU   -    CU       UCAGU    -    C     ---    C   GG UAUGC UGGCUCC UGUAUGCCA  CGC GUAG  GCCAAAC     UGAA ACAA UGCCU   UCUC C   || ||||| ||||||| |||||||||  ||| ||||  |||||||     |||| |||| |||||   |||| G   CC GUACG ACCGAGG GCGUGCGGU  GCG CAUC  CGGUUUG     GCUU UGUU ACGGA   AGAG G --  A     A       A         AG   U    -U       --CAU    G    -     CUU    C |
Stem-loop sequence | GGGGAUAUGCCUGGCUCCCUGUAUGCCACUCGCGUAGCUGCCAAACUCAGUUGAAACAACUGCCUUCUCCCGGCGAGAUUCAGGCAUUGUGUUCGUACGUUUGGCUCUACUGCGGAUGGCGUGCGAGGAGCCAAGCAUGACC |
1 | PMID:12101121
"MicroRNAs in plants"; Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP; Genes Dev. 16:1616-1626(2002). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |