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BaseInfo

ncRNA ID	novel_zma_miR446
Species	Zea mays
Class	miRNA
Genome position	Chr7:165932789-165932874 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089712;SRR2089713;SRR2089715;SRR2287159;SRR2287161;SRR2287162;SRR2287164;SRR2287165;SRR1618883;SRR1745812;SRR4237220;SRR4237222;SRR4237226;SRR1997865;SRR5451003;SRR5451004;SRR1997866;SRR2089701;SRR2089704
Length	21
Mature sequence(if miRNA)	66 - UCAGGAGAGAUGACACCGACG - 86
Stem-loop(if miRNA)	---     A           G  GC         -----    C A    UCAGG GAGAUGACACC AC  CAGACGGAC     CGGU C U    ||||| ||||||||||| ||  |||||||||     |||| |    AGUCC CUCUACUGUGG UG  GUCUGCCUG     GCCG G C CGA     G           G  AA         UCUGU    C C
Stem-loop sequence	UCAGGAGAGAUGACACCGACGCCAGACGGACCGGUCCAUCCGCGCCGUGUCUGUCCGUCUGAAGUGGGUGUCAUCUCGCCUGAAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001158897.1	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   =|||||||||||||||||||| targets:130   UGUCGGUGUCAUCUCUCCUGA   150 Target Full Sequence	0.0	Zea mays calcium-binding allergen Ole e 8 (LOC100286009), mRNA	NA	coding protein	psRNATarget
EU975155.1	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   =|||||||||||||||||||| targets:130   UGUCGGUGUCAUCUCUCCUGA   150 Target Full Sequence	0.0	Zea mays clone 475282 calcium-binding allergen Ole e 8 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020537598.1	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   =|||||||||||||||*|||| targets:476   UGUCGGUGUCAUCUCUACUGA   496 Target Full Sequence	1.5	PREDICTED: Zea mays probable calcium-binding protein CML21 (LOC109939414), mRNA	NA	coding protein	psRNATarget
BT066379.1	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   *|||||||||=|||||||||* targets:207   GGUCGGUGUCGUCUCUCCUGC   227 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0032C20 mRNA, complete cds	NA	coding protein	psRNATarget
AY107164.1	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   **||*|||||*|||||||||| targets:648   GUUCCGUGUCUUCUCUCCUGA   668 Target Full Sequence	2.5	Zea mays PCO074648 mRNA sequence	NA	coding protein	psRNATarget
BT036792.1	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   **||*|||||*|||||||||| targets:696   GUUCCGUGUCUUCUCUCCUGA   716 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0139E16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001139329.2	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   **||*|||||*|||||||||| targets:748   GUUCCGUGUCUUCUCUCCUGA   768 Target Full Sequence	2.5	Zea mays Phenylalanine--tRNA ligase chloroplastic/mitochondrial (LOC100194290), mRNA	NA	coding protein	psRNATarget
EU960688.1	ncRNA:21   GCAGCCACAGUAGAGAGGACU   1   **||*|||||*|||||||||| targets:751   GUUCCGUGUCUUCUCUCCUGA   771 Target Full Sequence	2.5	Zea mays clone 227479 ATP binding protein mRNA, complete cds	NA	coding protein	psRNATarget