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BaseInfo

ncRNA ID novel_zma_miR445
Species Zea mays
Class miRNA
Genome position Chr7:170347745-170347842 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR5451003;SRR5451004;SRR2089701;SRR2089704;SRR2089705
Length 22
Mature sequence(if miRNA) 77 - AGUGGAUUGAAGGGGGAUUGGA - 98
Stem-loop(if miRNA) --                                              A
  AGUGGAUUGAAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUACA A
  ||||||||||||||||||||||||||||||||||||||||||||||
  UCACCUAACUUCCCCCUAACCUCCCCUAAUUUAGGGGAGGAUAUGU U
CC                                              U
Stem-loop sequence AGUGGAUUGAAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUACAAAUUUGUAUAGGAGGGGAUUUAAUCCCCUCCAAUCCCCCUUCAAUCCACUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020547439.1
ncRNA:22   AGGUUAGGGGGAAGUUAGGUGA   1
  ||*||*=|||||||||||||||
targets:3905   UCAAAAUCCCCUUCAAUCCACU   3926

2.0 PREDICTED: Zea mays hypothetical protein (LOC100194067), transcript variant X1, mRNA NA coding protein psRNATarget