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BaseInfo

ncRNA ID	novel_zma_miR441
Species	Zea mays
Class	miRNA
Genome position	Chr7:176989982-176990206 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2287031;SRR2287163;SRR2287164;SRR5105959;SRR5451004;SRR5451005;SRR5451006;SRR2089699;SRR2089703
Length	24
Mature sequence(if miRNA)	202 - ACAUAGAAGACUGGUGCACAUGGU - 225
Stem-loop(if miRNA)	--    A   G C                                                       AUAG   A   -UU     -  AAAUA       C  C ACUACA   ACAU GAA A UGGUGCACAUGGUGCACAUAUUAAAUCAUCACUACUCAUUUUAGAUCUAACGUCU    UUG UUA   CAUUU AC     ACACCUU CA C      C   |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||   ||||| ||     ||||||| || |      A   UGUA CUU U ACCACGUGUACCACGUGUAUAAUUUAGUAGUGGUGAGUAAAAUCUAGAUUGCAGA    AAC AAU   GUAAA UG     UGUGGGA GU G      C CG    C   G A                                                       GAUA   A   CAU     A  AAUCC       A  U CACCAC
Stem-loop sequence	ACAUAGAAGACUGGUGCACAUGGUGCACAUAUUAAAUCAUCACUACUCAUUUUAGAUCUAACGUCUAUAGUUGAUUAUUCAUUUACAAAUAACACCUUCCACCACUACACACCACCACGUUGAAGGGUGUCCUAAGUAAAAUGUACUAAACAAAUAGAGACGUUAGAUCUAAAAUGAGUGGUGAUGAUUUAAUAUGUGCACCAUGUGCACCAAUGUUCCAUGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552764.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |||||||*|||||||||||||||| targets:3118   ACCAUGUACACCAGUCUUCUAUGU   3141 Target Full Sequence	1.0	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681116.2	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |||||||*|||||||||||||||| targets:3296   ACCAUGUACACCAGUCUUCUAUGU   3319 Target Full Sequence	1.0	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235128.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |=|||||*|||||*|||||||||| targets:224   AUCAUGUACACCAAUCUUCUAUGU   247 Target Full Sequence	2.5	Sequence 1123 from Patent EP2985353	NA	coding protein	psRNATarget
JB163459.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |=|||||*|||||*|||||||||| targets:224   AUCAUGUACACCAAUCUUCUAUGU   247 Target Full Sequence	2.5	Sequence 1123 from Patent EP2559767	NA	coding protein	psRNATarget
HI402998.1	ncRNA:24   UGGUACACGUGGUCAGAAGAUACA   1   |=|||||*|||||*|||||||||| targets:224   AUCAUGUACACCAAUCUUCUAUGU   247 Target Full Sequence	2.5	Sequence 1123 from Patent EP2074227	NA	coding protein	psRNATarget