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BaseInfo

ncRNA ID novel_zma_miR439
Species Zea mays
Class miRNA
Genome position Chr7:178607812-178607876 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR2089714;SRR2089715;SRR2089701;SRR2089708
Length 24
Mature sequence(if miRNA) 42 - AUGUAUUGAGGUGGAUUAGGGUGU - 65
Stem-loop(if miRNA) --A   AU            G       C   
   UGU  UGAGGUGGAUUA GGUGUAA UUAA
   |||  |||||||||||| ||||||| |||A
   ACA  ACUCCACCUAAU CCACAUU AAUC
UAC   CC            A       U   
Stem-loop sequence AUGUAUUGAGGUGGAUUAGGGUGUAACUUAAACUAAUUUACACCAUAAUCCACCUCACCACACAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ069719.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||||||||||||||||||||
targets:53   ACACCCUAAUCCACCUCAAUACAU   76

0.0 TSA: Zea mays contig05355, mRNA sequence NA coding protein psRNATarget
LQ235080.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||||||||||||||||||||
targets:60   ACACCCUAAUCCACCUCAAUACAU   83

0.0 Sequence 1075 from Patent EP2985353 NA coding protein psRNATarget
HI402950.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||||||||||||||||||||
targets:60   ACACCCUAAUCCACCUCAAUACAU   83

0.0 Sequence 1075 from Patent EP2074227 NA coding protein psRNATarget
JB163411.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||||||||||||||||||||
targets:60   ACACCCUAAUCCACCUCAAUACAU   83

0.0 Sequence 1075 from Patent EP2559767 NA coding protein psRNATarget
AY103846.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||||||||=||||||||||||
targets:974   ACACCCUAAUCUACCUCAAUACAU   997

1.5 Zea mays PCO130752 mRNA sequence NA coding protein psRNATarget
EU962825.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||||||||=||||||||||||
targets:954   ACACCCUAAUCUACCUCAAUACAU   977

1.5 Zea mays clone 245793 mRNA sequence NA coding protein psRNATarget
BT066687.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||||||||=||||||||||||
targets:870   ACACCCUAAUCUACCUCAAUACAU   893

1.5 Zea mays full-length cDNA clone ZM_BFb0047M01 mRNA, complete cds NA coding protein psRNATarget
NM_001175915.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||||||||=||||||||||||
targets:870   ACACCCUAAUCUACCUCAAUACAU   893

1.5 Zea mays U2 small nuclear ribonucleoprotein B'' (LOC100383254), mRNA NA coding protein psRNATarget
EZ108049.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||||||||=||||||||||||
targets:263   ACACCCUAAUCUACCUCAAUACAU   286

1.5 TSA: Zea mays contig43707, mRNA sequence NA coding protein psRNATarget
HI403492.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|||||||||||||||||||
targets:76   ACACUCUAAUCCACCUCAAUACAU   99

0.0 Sequence 1617 from Patent EP2074227 NA coding protein psRNATarget
JB163953.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|||||||||||||||||||
targets:76   ACACUCUAAUCCACCUCAAUACAU   99

0.0 Sequence 1617 from Patent EP2559767 NA coding protein psRNATarget
LQ235622.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|||||||||||||||||||
targets:76   ACACUCUAAUCCACCUCAAUACAU   99

0.0 Sequence 1617 from Patent EP2985353 NA coding protein psRNATarget
LQ235139.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|||||=|||||||||||||
targets:88   ACACUCUAAUUCACCUCAAUACAU   111

1.0 Sequence 1134 from Patent EP2985353 NA coding protein psRNATarget
JB163470.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|||||=|||||||||||||
targets:88   ACACUCUAAUUCACCUCAAUACAU   111

1.0 Sequence 1134 from Patent EP2559767 NA coding protein psRNATarget
HI403009.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|||||=|||||||||||||
targets:88   ACACUCUAAUUCACCUCAAUACAU   111

1.0 Sequence 1134 from Patent EP2074227 NA coding protein psRNATarget
XM_020543503.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||=||||||||||||||||=||
targets:1871   AUACUCUAAUCCACCUCAAUAUAU   1894

1.5 PREDICTED: Zea mays putative RNA-binding protein ARP1 (LOC100216697), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020543504.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||=||||||||||||||||=||
targets:1870   AUACUCUAAUCCACCUCAAUAUAU   1893

1.5 PREDICTED: Zea mays putative RNA-binding protein ARP1 (LOC100216697), transcript variant X2, mRNA NA coding protein psRNATarget
EU949321.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||||||||||||||||||*||
targets:522   ACACCCUAAUCCACCUCAAUAGAU   545

1.5 Zea mays clone 401072 mRNA sequence NA coding protein psRNATarget
LQ235196.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||||||||||||
targets:61   ACACCCCAAUCCACCUCAAUACAU   84

1.0 Sequence 1191 from Patent EP2985353 NA coding protein psRNATarget
JB163527.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||||||||||||
targets:61   ACACCCCAAUCCACCUCAAUACAU   84

1.0 Sequence 1191 from Patent EP2559767 NA coding protein psRNATarget
HI403066.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||||||||||||
targets:61   ACACCCCAAUCCACCUCAAUACAU   84

1.0 Sequence 1191 from Patent EP2074227 NA coding protein psRNATarget
LQ235096.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||*||||||||||||||||||
targets:60   ACACCAUAAUCCACCUCAAUACAU   83

1.0 Sequence 1091 from Patent EP2985353 NA coding protein psRNATarget
HI402966.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||*||||||||||||||||||
targets:60   ACACCAUAAUCCACCUCAAUACAU   83

1.0 Sequence 1091 from Patent EP2074227 NA coding protein psRNATarget
JB163427.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||*||||||||||||||||||
targets:60   ACACCAUAAUCCACCUCAAUACAU   83

1.0 Sequence 1091 from Patent EP2559767 NA coding protein psRNATarget
AY107149.2
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||=|||||||||||||||||*||
targets:1298   ACAUCCUAAUCCACCUCAAUAGAU   1321

1.5 Zea mays PCO139446 mRNA sequence NA coding protein psRNATarget
BT085755.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||=*|||||||||||||||||
targets:883   ACACCUCAAUCCACCUCAAUACAU   906

2.0 Zea mays full-length cDNA clone ZM_BFc0057I16 mRNA, complete cds NA coding protein psRNATarget
NM_001156128.2
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||=*|||||||||||||||||
targets:883   ACACCUCAAUCCACCUCAAUACAU   906

2.0 Zea mays protein SFT2 (LOC100283226), mRNA NA coding protein psRNATarget
AY110566.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||||=|||||||
targets:295   ACACCCCAAUCCACCUUAAUACAU   318

2.5 Zea mays CL45690_1 mRNA sequence NA coding protein psRNATarget
EU941642.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||||=*|||||||||||||||||
targets:10   ACACCUCAAUCCACCUCAAUACAU   33

2.0 Zea mays clone 1468727 mRNA sequence NA coding protein psRNATarget
JB163781.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||=|||||||||
targets:62   ACACCCCAAUCCACUUCAAUACAU   85

2.5 Sequence 1445 from Patent EP2559767 NA coding protein psRNATarget
LQ235491.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||||=|||||||
targets:62   ACACCCCAAUCCACCUUAAUACAU   85

2.5 Sequence 1486 from Patent EP2985353 NA coding protein psRNATarget
HI403320.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||=|||||||||
targets:62   ACACCCCAAUCCACUUCAAUACAU   85

2.5 Sequence 1445 from Patent EP2074227 NA coding protein psRNATarget
JB163782.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||=|||||||||
targets:62   ACACCCCAAUCCACUUCAAUACAU   85

2.5 Sequence 1446 from Patent EP2559767 NA coding protein psRNATarget
JB163822.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||||=|||||||
targets:62   ACACCCCAAUCCACCUUAAUACAU   85

2.5 Sequence 1486 from Patent EP2559767 NA coding protein psRNATarget
LQ235450.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||=|||||||||
targets:62   ACACCCCAAUCCACUUCAAUACAU   85

2.5 Sequence 1445 from Patent EP2985353 NA coding protein psRNATarget
HI403321.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||=|||||||||
targets:62   ACACCCCAAUCCACUUCAAUACAU   85

2.5 Sequence 1446 from Patent EP2074227 NA coding protein psRNATarget
LQ235451.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||=|||||||||
targets:62   ACACCCCAAUCCACUUCAAUACAU   85

2.5 Sequence 1446 from Patent EP2985353 NA coding protein psRNATarget
HI403361.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||||=|||||||
targets:62   ACACCCCAAUCCACCUUAAUACAU   85

2.5 Sequence 1486 from Patent EP2074227 NA coding protein psRNATarget
JB163457.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*||||||=||||||||||
targets:58   ACACCCCAAUCCAUCUCAAUACAU   81

2.5 Sequence 1121 from Patent EP2559767 NA coding protein psRNATarget
HI402996.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*||||||=||||||||||
targets:58   ACACCCCAAUCCAUCUCAAUACAU   81

2.5 Sequence 1121 from Patent EP2074227 NA coding protein psRNATarget
LQ235126.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*||||||=||||||||||
targets:58   ACACCCCAAUCCAUCUCAAUACAU   81

2.5 Sequence 1121 from Patent EP2985353 NA coding protein psRNATarget
EU973948.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=|=||||||||||||||||*|||
targets:887   AUAUCCUAAUCCACCUCAAUCCAU   910

1.5 Zea mays clone 424847 plasma membrane associated protein mRNA, complete cds NA coding protein psRNATarget
NM_001158675.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=|=||||||||||||||||*|||
targets:887   AUAUCCUAAUCCACCUCAAUCCAU   910

1.5 Zea mays plasma membrane associated protein (LOC100285785), mRNA NA coding protein psRNATarget
HI403017.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||||*|||||=|||||||||||
targets:61   AUACCCCAAUCCGCCUCAAUACAU   84

2.5 Sequence 1142 from Patent EP2074227 NA coding protein psRNATarget
HI403138.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||=||||||*||||||||||||
targets:61   AUACUCUAAUCGACCUCAAUACAU   84

1.5 Sequence 1263 from Patent EP2074227 NA coding protein psRNATarget
LQ235147.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||||*|||||=|||||||||||
targets:61   AUACCCCAAUCCGCCUCAAUACAU   84

2.5 Sequence 1142 from Patent EP2985353 NA coding protein psRNATarget
JB163599.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||=||||||*||||||||||||
targets:61   AUACUCUAAUCGACCUCAAUACAU   84

1.5 Sequence 1263 from Patent EP2559767 NA coding protein psRNATarget
JB163478.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||||*|||||=|||||||||||
targets:61   AUACCCCAAUCCGCCUCAAUACAU   84

2.5 Sequence 1142 from Patent EP2559767 NA coding protein psRNATarget
LQ235268.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |=||=||||||*||||||||||||
targets:61   AUACUCUAAUCGACCUCAAUACAU   84

1.5 Sequence 1263 from Patent EP2985353 NA coding protein psRNATarget
LQ235449.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||=||||||||||||*
targets:62   ACACCCCAAUUCACCUCAAUACAA   85

3.0 Sequence 1444 from Patent EP2985353 NA coding protein psRNATarget
HI403319.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||=||||||||||||*
targets:62   ACACCCCAAUUCACCUCAAUACAA   85

3.0 Sequence 1444 from Patent EP2074227 NA coding protein psRNATarget
JB163780.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||=||||||||||||*
targets:62   ACACCCCAAUUCACCUCAAUACAA   85

3.0 Sequence 1444 from Patent EP2559767 NA coding protein psRNATarget
EU963469.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|||=|||||||||||||||||*
targets:973   UAACCUUAAUCCACCUCAAUACAA   996

2.0 Zea mays clone 263014 mRNA sequence NA coding protein psRNATarget
LQ235506.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||*|||||||||
targets:62   ACACCCCAAUCCACAUCAAUACAU   85

2.5 Sequence 1501 from Patent EP2985353 NA coding protein psRNATarget
HI403376.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||*|||||||||
targets:62   ACACCCCAAUCCACAUCAAUACAU   85

2.5 Sequence 1501 from Patent EP2074227 NA coding protein psRNATarget
JB163837.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||*|||||||||
targets:62   ACACCCCAAUCCACAUCAAUACAU   85

2.5 Sequence 1501 from Patent EP2559767 NA coding protein psRNATarget
JB163536.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||*|||||||||
targets:61   ACACCCCAAUCCACAUCAAUACAU   84

2.5 Sequence 1200 from Patent EP2559767 NA coding protein psRNATarget
HI403075.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||*|||||||||
targets:61   ACACCCCAAUCCACAUCAAUACAU   84

2.5 Sequence 1200 from Patent EP2074227 NA coding protein psRNATarget
LQ235205.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||||*|||||||*|||||||||
targets:61   ACACCCCAAUCCACAUCAAUACAU   84

2.5 Sequence 1200 from Patent EP2985353 NA coding protein psRNATarget
JB167693.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|||=|||||||||||||||||*
targets:23   UAACCUUAAUCCACCUCAAUACAA   46

2.0 Sequence 5357 from Patent EP2559767 NA coding protein psRNATarget
LQ239362.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|||=|||||||||||||||||*
targets:23   UAACCUUAAUCCACCUCAAUACAA   46

2.0 Sequence 5357 from Patent EP2985353 NA coding protein psRNATarget
HI407232.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|||=|||||||||||||||||*
targets:23   UAACCUUAAUCCACCUCAAUACAA   46

2.0 Sequence 5357 from Patent EP2074227 NA coding protein psRNATarget
XM_020537806.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |*|||*|||||||||||||||=||
targets:5354   AAACCAUAAUCCACCUCAAUAUAU   5377

2.5 PREDICTED: Zea mays putative ubiquitin-like-specific protease 1B (LOC103625696), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020537807.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |*|||*|||||||||||||||=||
targets:5012   AAACCAUAAUCCACCUCAAUAUAU   5035

2.5 PREDICTED: Zea mays putative ubiquitin-like-specific protease 1B (LOC103625696), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020537805.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |*|||*|||||||||||||||=||
targets:4988   AAACCAUAAUCCACCUCAAUAUAU   5011

2.5 PREDICTED: Zea mays putative ubiquitin-like-specific protease 1B (LOC103625696), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020537809.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |*|||*|||||||||||||||=||
targets:4988   AAACCAUAAUCCACCUCAAUAUAU   5011

2.5 PREDICTED: Zea mays putative ubiquitin-like-specific protease 1B (LOC103625696), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020537808.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |*|||*|||||||||||||||=||
targets:2477   AAACCAUAAUCCACCUCAAUAUAU   2500

2.5 PREDICTED: Zea mays putative ubiquitin-like-specific protease 1B (LOC103625696), transcript variant X4, mRNA NA coding protein psRNATarget
HI403262.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||=||*||||||||||||*||||
targets:62   ACAUCCCAAUCCACCUCAACACAU   85

2.5 Sequence 1387 from Patent EP2074227 NA coding protein psRNATarget
LQ235392.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||=||*||||||||||||*||||
targets:62   ACAUCCCAAUCCACCUCAACACAU   85

2.5 Sequence 1387 from Patent EP2985353 NA coding protein psRNATarget
JB163724.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||=||*||||||||||||*||||
targets:62   ACAUCCCAAUCCACCUCAACACAU   85

2.5 Sequence 1388 from Patent EP2559767 NA coding protein psRNATarget
HI403263.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||=||*||||||||||||*||||
targets:62   ACAUCCCAAUCCACCUCAACACAU   85

2.5 Sequence 1388 from Patent EP2074227 NA coding protein psRNATarget
LQ235393.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||=||*||||||||||||*||||
targets:62   ACAUCCCAAUCCACCUCAACACAU   85

2.5 Sequence 1388 from Patent EP2985353 NA coding protein psRNATarget
JB163723.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |||=||*||||||||||||*||||
targets:62   ACAUCCCAAUCCACCUCAACACAU   85

2.5 Sequence 1387 from Patent EP2559767 NA coding protein psRNATarget
HI403455.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||*=|||||||||||||*||||
targets:60   ACACAUUAAUCCACCUCAACACAU   83

2.5 Sequence 1580 from Patent EP2074227 NA coding protein psRNATarget
LQ235585.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||*=|||||||||||||*||||
targets:60   ACACAUUAAUCCACCUCAACACAU   83

2.5 Sequence 1580 from Patent EP2985353 NA coding protein psRNATarget
JB163916.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||*=|||||||||||||*||||
targets:60   ACACAUUAAUCCACCUCAACACAU   83

2.5 Sequence 1580 from Patent EP2559767 NA coding protein psRNATarget
LQ235616.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|*||||||||||||*||||
targets:58   ACACUCAAAUCCACCUCAACACAU   81

2.5 Sequence 1611 from Patent EP2985353 NA coding protein psRNATarget
HI403486.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|*||||||||||||*||||
targets:58   ACACUCAAAUCCACCUCAACACAU   81

2.5 Sequence 1611 from Patent EP2074227 NA coding protein psRNATarget
JB163947.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|*||||||||||||*||||
targets:58   ACACUCAAAUCCACCUCAACACAU   81

2.5 Sequence 1611 from Patent EP2559767 NA coding protein psRNATarget
EU963895.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|=||*|||||||||||||||||
targets:980   UGAUCCCAAUCCACCUCAAUACAU   1003

1.0 Zea mays clone 273839 protein SFT2 mRNA, complete cds NA coding protein psRNATarget
LQ238868.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|=||*|||||||||||||||||
targets:64   UGAUCCCAAUCCACCUCAAUACAU   87

1.0 Sequence 4863 from Patent EP2985353 NA coding protein psRNATarget
JB167199.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|=||*|||||||||||||||||
targets:64   UGAUCCCAAUCCACCUCAAUACAU   87

1.0 Sequence 4863 from Patent EP2559767 NA coding protein psRNATarget
HI406738.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  **|=||*|||||||||||||||||
targets:64   UGAUCCCAAUCCACCUCAAUACAU   87

1.0 Sequence 4863 from Patent EP2074227 NA coding protein psRNATarget
BT085111.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  |*|==|*|||||||||||||||||
targets:1191   AAAUUCCAAUCCACCUCAAUACAU   1214

1.0 Zea mays full-length cDNA clone ZM_BFb0292J13 mRNA, complete cds NA coding protein psRNATarget
XM_008677341.2
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|*||*|||||||||||||*
targets:2958   ACACUCCAAACCACCUCAAUACAC   2981

3.0 PREDICTED: Zea mays cation/H(+) antiporter 15 (LOC103651657), mRNA NA coding protein psRNATarget
XM_020550625.1
ncRNA:24   UGUGGGAUUAGGUGGAGUUAUGUA   1
  ||||=|*||*|||||||||||||*
targets:2942   ACACUCCAAACCACCUCAAUACAC   2965

3.0 PREDICTED: Zea mays cation/H(+) antiporter 15-like (LOC109944899), mRNA NA coding protein psRNATarget
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