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BaseInfo

ncRNA ID	novel_zma_miR436
Species	Zea mays
Class	miRNA
Genome position	Chr10:147928253-147928332 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089712;SRR2089714;SRR2089715;SRR2287161;SRR2287164;SRR2287165;SRR5451003;SRR5451005;SRR1997866;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089705;SRR2089706;SRR2089707;SRR2089708
Length	24
Mature sequence(if miRNA)	57 - GGGGCCAGUGGCAUACAAGGGAUG - 80
Stem-loop(if miRNA)	--                 A  GG     AAG    AU UU   UCCCUUGUGUGCCACUG GU  CAUAU   UAUA  U  U   ||||||||||||||||| ||  |||||   ||||  |   AGGGAACAUACGGUGAC CG  GUGUA   GUAU  G  G GU                 -  GG     -CA    CU UG
Stem-loop sequence	UCCCUUGUGUGCCACUGAGUGGCAUAUAAGUAUAAUUUUUGGUGUCUAUGACAUGUGGGGCCAGUGGCAUACAAGGGAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008655872.2	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |||=|||||||||||||||||||| targets:1114   CAUUCCUUGUAUGCCACUGGCCCC   1137 Target Full Sequence	0.0	PREDICTED: Zea mays glutathione S-transferase T3-like (LOC103634314), mRNA	NA	coding protein	psRNATarget
EU945728.1	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |||==|||||||||||||||=||| targets:1036   CAUUUCUUGUAUGCCACUGGUCCC   1059 Target Full Sequence	1.5	Zea mays clone 283792 mRNA sequence	NA	coding protein	psRNATarget
XM_020547541.1	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |=|=||||||=||||||||||||| targets:4240   CGUUCCUUGUGUGCCACUGGCCCC   4263 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001147730.1	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |=|=||||||=||||||||||=|| targets:641   CGUUCCUUGUGUGCCACUGGCUCC   664 Target Full Sequence	2.5	Zea mays Vacuolar protein sorting-associated protein 24 homolog 1 (umc2748), mRNA	NA	coding protein	psRNATarget
BT040698.1	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |=|=||||||=||||||||||=|| targets:641   CGUUCCUUGUGUGCCACUGGCUCC   664 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0119B19 mRNA, complete cds	NA	coding protein	psRNATarget
JB167298.1	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |||=*|||||=||||||||||||= targets:12   CAUUACUUGUGUGCCACUGGCCCU   35 Target Full Sequence	2.0	Sequence 4962 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238967.1	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |||=*|||||=||||||||||||= targets:12   CAUUACUUGUGUGCCACUGGCCCU   35 Target Full Sequence	2.0	Sequence 4962 from Patent EP2985353	NA	coding protein	psRNATarget
HI406837.1	ncRNA:24   GUAGGGAACAUACGGUGACCGGGG   1   |||=*|||||=||||||||||||= targets:12   CAUUACUUGUGUGCCACUGGCCCU   35 Target Full Sequence	2.0	Sequence 4962 from Patent EP2074227	NA	coding protein	psRNATarget