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BaseInfo

ncRNA ID	novel_zma_miR426
Species	Zea mays
Class	miRNA
Genome position	Chr7:144314592-144314654 [+]
Reference genome	RefGen_v4
Source	SRR2089709
Length	24
Mature sequence(if miRNA)	1 - GCGGGCCUCCGGGAAGACGAGCGG - 24
Stem-loop(if miRNA)	--G     -        A    -A    CA  G    CGGGC CUCCGGGA GACG  GCGG  GC G    ||||| |||||||| ||||  ||||  ||    GCUCG GAGGCCUU UUGU  CGCC  CG G CUG     A        G    GG    -C  C
Stem-loop sequence	GCGGGCCUCCGGGAAGACGAGCGGCAGCGGGCGCCCCGCGGUGUUGUUCCGGAGAGCUCGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT064916.1	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   |||||||||||||||||||||||| targets:1221   CCGCUCGUCUUCCCGGAGGCCCGC   1244 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0013F05 mRNA, complete cds	NA	coding protein	psRNATarget
EU957785.1	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   |||||||||||||||||||||||| targets:1248   CCGCUCGUCUUCCCGGAGGCCCGC   1271 Target Full Sequence	0.0	Zea mays clone 1616578 xylem serine proteinase 1 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154679.2	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   ||||||||||||||||||*||||| targets:1248   CCGCUCGUCUUCCCGGAGUCCCGC   1271 Target Full Sequence	1.5	Zea mays uncharacterized LOC100193436 (LOC100193436), mRNA	NA	coding protein	psRNATarget
BT039362.1	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   **||*||||||||||||||||*|| targets:393   GAGCGCGUCUUCCCGGAGGCCAGC   416 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0006M13 mRNA, complete cds	NA	coding protein	psRNATarget
BT035523.1	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   **||*||||||||||||||||*|| targets:426   GAGCGCGUCUUCCCGGAGGCCAGC   449 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0068A11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001352045.1	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   **||*||||||||||||||||*|| targets:462   GAGCGCGUCUUCCCGGAGGCCAGC   485 Target Full Sequence	1.5	Zea mays uncharacterized LOC100191288 (LOC100191288), mRNA	NA	coding protein	psRNATarget
NM_001136722.1	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   **||*||||||||||||||||*|| targets:452   GAGCGCGUCUUCCCGGAGGCCAGC   475 Target Full Sequence	1.5	Zea mays uncharacterized LOC100191288 (LOC100191288), mRNA	NA	coding protein	psRNATarget
BT033335.1	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   **||*||||||||||||||||*|| targets:452   GAGCGCGUCUUCCCGGAGGCCAGC   475 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0207F03 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020537672.1	ncRNA:24   GGC-----GAGCAGAAGGGCCUCCGGGCG   1   |||-----||||||*||||||||*||||| targets:377   CCGAGCUCCUCGUCCUCCCGGAGCCCCGC   405 Target Full Sequence	2.5	PREDICTED: Zea mays antifreeze protein Maxi-like (LOC109939492), mRNA	NA	coding protein	psRNATarget
BT069086.2	ncRNA:24   GGCGAGCAGAAGGGCCUCCGGGCG   1   ||||-|||||*|*||||||||||| targets:1203   CCGC-CGUCUCCGCGGAGGCCCGC   1225 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0169F22 mRNA, complete cds	NA	coding protein	psRNATarget