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BaseInfo

ncRNA ID novel_zma_miR422
Species Zea mays
Class miRNA
Genome position Chr6:110898823-110898875 [+]
Reference genome RefGen_v4
Source SRR2089709
Length 24
Mature sequence(if miRNA) 1 - AGUACUUUUUCGGACACUCGGCAA - 24
Stem-loop(if miRNA) --   A      CG            A
  AGU CUUUUU  GACACUCGGCAA G
  ||| ||||||  |||||||||||| A
  UCA GAAAAG  CUGUGAGCCGUU C
GC   C      --            U
Stem-loop sequence AGUACUUUUUCGGACACUCGGCAAAGACUUUGCCGAGUGUCGAAAAGCACUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020537700.1
ncRNA:24   AACGGCUCACAGGCUUUUUCAUGA   1
  **|=*||*||||||||=|||||||
targets:458   CAGUAGACUGUCCGAAGAAGUACU   481

2.5 PREDICTED: Zea mays glutathione S-transferase T3-like (LOC109939515), mRNA NA coding protein psRNATarget