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BaseInfo

ncRNA ID	novel_zma_miR413
Species	Zea mays
Class	miRNA
Genome position	Chr6:85473164-85473384 [+]
Reference genome	RefGen_v4
Source	SRR2089709
Length	23
Mature sequence(if miRNA)	199 - CACCGGACUGUGCGGUGAGCCAA - 221
Stem-loop(if miRNA)	--   G    AG  U        AG  AACG     -   AGCCAAC    -        AA  -      U  -C          G  --A  GGUCUGAUGGGAGCACCGGACUAUC   GGU CACC  AC GUCCGGUG  CC    GUCGG CCG       GGUU GGCCGCGC  UC CGCGCG GA  GCGUGGCCGA CC   AC                         C   ||| ||||  || ||||||||  ||    ||||| |||       |||| ||||||||  || |||||| ||  |||||||||| ||   ||   CCG GUGG  UG CAGGCCAC  GG    UAGUC GGC       CCGA CCGGUGCG  AG GCGCGC CU  CGCGCCGGCU GG   CC                         G AA   A    CG  U        GA  ---G     U   -----AA    G        -C  U      -  AA          -  CAA  GAGUGGCCUGUCAGGCGACGUGGUG
Stem-loop sequence	GGUGCACCAGACUGUCCGGUGAGCCAACGGUCGGCCGAGCCAACGGUUGGCCGCGCAAUCCGCGCGUGACGCGUGGCCGAGCCAACGGUCUGAUGGGAGCACCGGACUAUCCGGUGGUGCAGCGGACUGUCCGGUGAGCCAACGGUCGGCCGCGCAAUCCGCGCGUGACGCGUGGCCGAGCCAACGGUCUGAUGGGAGCACCGGACUGUGCGGUGAGCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT068112.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:582   UUGGCUCACCGGACAGUCCGGUG   604 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:376   CUGGCGCACCGGACAGUCCGGUG   398 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:471   GGUGCACACCGGACAGUCCGGUG   493 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:601   GGUGCACACCGGACAGUCCGGUG   623 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:718   UUGGCUCACCGGACAGUCCGGUG   740 Target Full Sequence	1.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|||*|||||*||||||||||| targets:497   CGGGCGCACCGGACAGUCCGGUG   519 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:737   GGUGCACACCGGACAGUCCGGUG   759 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:840   GGUGCACACCGGACAGUCCGGUG   862 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:623   GGUGCACACCGGACAGUCCGGUG   645 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
BT061141.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:718   UUGGCUCACCGGACAGUCCGGUG   740 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|||*|||||*||||||||||| targets:497   CGGGCGCACCGGACAGUCCGGUG   519 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:737   GGUGCACACCGGACAGUCCGGUG   759 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:840   GGUGCACACCGGACAGUCCGGUG   862 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:623   GGUGCACACCGGACAGUCCGGUG   645 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT068871.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:689   UUGGCUCACCGGACAGUCCGGUG   711 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0146G02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176621.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:689   UUGGCUCACCGGACAGUCCGGUG   711 Target Full Sequence	1.5	Zea mays uncharacterized LOC100384010 (LOC100384010), mRNA	NA	coding protein	psRNATarget
BT065921.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:696   UUGGCUCACCGGACAGUCCGGUG   718 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||*|||||*||||||||||| targets:601   UUGGCGCACCGGACAGUCCGGUG   623 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:505   CUGGCGCACCGGACAGUCCGGUG   527 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:715   GGUGCACACCGGACAGUCCGGUG   737 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:696   UUGGCUCACCGGACAGUCCGGUG   718 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||*|||||*||||||||||| targets:601   UUGGCGCACCGGACAGUCCGGUG   623 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:505   CUGGCGCACCGGACAGUCCGGUG   527 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:715   GGUGCACACCGGACAGUCCGGUG   737 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
BT066461.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:707   UUGGCUCACCGGACAGUCCGGUG   729 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:679   UUGGCUCACCGGACAGUCCGGUG   701 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:581   CUGGCGCACCGGACAGUCCGGUG   603 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|||*|||||*||||||||||| targets:485   CGGGCGCACCGGACAGUCCGGUG   507 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:698   GGUGCACACCGGACAGUCCGGUG   720 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:600   GGUGCACACCGGACAGUCCGGUG   622 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:679   UUGGCUCACCGGACAGUCCGGUG   701 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:581   CUGGCGCACCGGACAGUCCGGUG   603 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|||*|||||*||||||||||| targets:485   CGGGCGCACCGGACAGUCCGGUG   507 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:698   GGUGCACACCGGACAGUCCGGUG   720 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:600   GGUGCACACCGGACAGUCCGGUG   622 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
BT061124.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:543   UUGGCUCACCGGACAGUCCGGUG   565 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|||*|||||*||||||||||| targets:332   CGGGCGCACCGGACAGUCCGGUG   354 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:543   UUGGCUCACCGGACAGUCCGGUG   565 Target Full Sequence	1.5	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|||*|||||*||||||||||| targets:332   CGGGCGCACCGGACAGUCCGGUG   354 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
EU940831.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:391   UUGGCUCACCGGACAGUCCGGUG   413 Target Full Sequence	1.5	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
EU940831.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:296   GGUGCACACCGGACAGUCCGGUG   318 Target Full Sequence	2.5	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
EU940974.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||||||||*||||||||||| targets:2751   UUGGCUCACCGGACAGUCCGGUG   2773 Target Full Sequence	1.5	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
EU940974.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:2540   CUGGCGCACCGGACAGUCCGGUG   2562 Target Full Sequence	2.5	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ||||||||=||*||||||||||| targets:622   UUGGCUCAUCGGACAGUCCGGUG   644 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:491   GUGGCGCACCGGACAGUCCGGUG   513 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:780   CUGGCGCACCGGACAGUCCGGUG   802 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||*||||=||*||||||||||| targets:699   AUGACUCAUCGGACAGUCCGGUG   721 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
BT066013.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ||||||||=||*||||||||||| targets:622   UUGGCUCAUCGGACAGUCCGGUG   644 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:491   GUGGCGCACCGGACAGUCCGGUG   513 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:780   CUGGCGCACCGGACAGUCCGGUG   802 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||*||||=||*||||||||||| targets:699   AUGACUCAUCGGACAGUCCGGUG   721 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||||*|||||*||||||||||| targets:724   UUGGCACACCGGACAGUCCGGUG   746 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||*|*|||||*||||||||||| targets:815   UUGUCCCACCGGACAGUCCGGUG   837 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:743   GGUGCACACCGGACAGUCCGGUG   765 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |||*|||||||*||||||||||| targets:4591   UUGUCUCACCGGACAGUCCGGUG   4613 Target Full Sequence	1.5	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|||*|||||*||||||||||| targets:4379   CGGGCGCACCGGACAGUCCGGUG   4401 Target Full Sequence	2.5	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
BT061123.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||*|||||||*||||||||||| targets:355   GUGCCUCACCGGACAGUCCGGUG   377 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
BT061123.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ***||*|||||*||||||||||| targets:284   GGUGCACACCGGACAGUCCGGUG   306 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
JB170393.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:31   GUGGCCCACCGGACAGUCCGGUG   53 Target Full Sequence	2.5	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
HI409932.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:31   GUGGCCCACCGGACAGUCCGGUG   53 Target Full Sequence	2.5	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:31   GUGGCCCACCGGACAGUCCGGUG   53 Target Full Sequence	2.5	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
EZ065990.1	ncRNA:22   ACCGAGUGGCGUGUCAGGCCAC   1   ||||*|||||*||||||||||| targets:1   UGGCGCACCGGACAGUCCGGUG   22 Target Full Sequence	2.5	TSA: Zea mays contig01624, mRNA sequence	NA	coding protein	psRNATarget
EZ066204.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:91   AUGGCGCACCGGACAGUCCGGUG   113 Target Full Sequence	2.5	TSA: Zea mays contig01838, mRNA sequence	NA	coding protein	psRNATarget
JB169871.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:12   CUGGCACACCGGACAGUCCGGUG   34 Target Full Sequence	2.5	Sequence 7535 from Patent EP2559767	NA	coding protein	psRNATarget
HI409410.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:12   CUGGCACACCGGACAGUCCGGUG   34 Target Full Sequence	2.5	Sequence 7535 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241540.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:12   CUGGCACACCGGACAGUCCGGUG   34 Target Full Sequence	2.5	Sequence 7535 from Patent EP2985353	NA	coding protein	psRNATarget
EZ106959.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:96   GUGGCACACCGGACAGUCCGGUG   118 Target Full Sequence	2.5	TSA: Zea mays contig42617, mRNA sequence	NA	coding protein	psRNATarget
EZ109126.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:175   AUGGCGCACCGGACAGUCCGGUG   197 Target Full Sequence	2.5	TSA: Zea mays contig44785, mRNA sequence	NA	coding protein	psRNATarget
U41079.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||*|||||||*||||||||||| targets:26   GUGACUCACCGGACAGUCCGGUG   48 Target Full Sequence	1.5	Zea mays copia-type retroelement PREM-2, partial sequence	NA	coding protein	psRNATarget
EU959991.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*||||||||*|||||||| targets:331   CUGGCGCACCGCACUGUCCGGUG   353 Target Full Sequence	2.5	Zea mays clone 221041 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008663618.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*||||||||*|||||||| targets:417   CUGGCGCACCGCACUGUCCGGUG   439 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103640564 (LOC103640564), mRNA	NA	coding protein	psRNATarget
BT083610.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:475   AUGGCGCACCGGACAGUCCGGUG   497 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:697   CUGGCACACCGGACAGUCCGGUG   719 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:799   GUGGCACACCGGACAGUCCGGUG   821 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
EU940845.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||||*|||||*||||||||||| targets:1381   GUGGCACACCGGACAGUCCGGUG   1403 Target Full Sequence	2.5	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
EU940845.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||*|||||||*||||||||||| targets:1471   GUGCCUCACCGGACAGUCCGGUG   1493 Target Full Sequence	1.5	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
BT069074.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||*=||||||*||||||||||| targets:682   GUGCUUCACCGGACAGUCCGGUG   704 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
EZ108756.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   |*|||*|||||*||||||||||| targets:146   UGGGCGCACCGGACAGUCCGGUG   168 Target Full Sequence	2.5	TSA: Zea mays contig44415, mRNA sequence	NA	coding protein	psRNATarget
BT086229.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   **|*|||||||*||||||||||| targets:748   AAGACUCACCGAACAGUCCGGUG   770 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget
BT086229.2	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   *||*|||*|||*||||||||||| targets:629   CUGACUCUCCGGACAGUCCGGUG   651 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget
BT038885.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ****|||||||*||||||||||| targets:748   GCCUCUCACCGGACAGUCCGGUG   770 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0337O17 mRNA, complete cds	NA	coding protein	psRNATarget
EU968231.1	ncRNA:23   AACCGAGUGGCGUGUCAGGCCAC   1   ****|||||||*||||||||||| targets:1119   GCCUCUCACCGGACAGUCCGGUG   1141 Target Full Sequence	1.5	Zea mays clone 317172 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget