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BaseInfo

ncRNA ID novel_zma_miR406
Species Zea mays
Class miRNA
Genome position Chr6:38172110-38172309 [+]
Reference genome RefGen_v4
Source SRR2089709
Length 23
Mature sequence(if miRNA) 1 - GUUUUUGAUAUGUUAUAUGGCUG - 23
Stem-loop(if miRNA) --      G U    U   U    GUUCUGAUGUCUAUCAAUGGUGGGUGAAGAUUGCCACCGGAUUAAUUUGAAGCUUGAUCGUCCUUAAUUAGAAAAA
  GUUUUU A AUGU AUA GGCU                                                                            U
  |||||| | |||| ||| ||||                                                                            G
  CAAGAG U UACG UAU UUGA                                                                            U
UA      G C    U   -    AGUCAGGUCAGUUUCGAAGUUAGGUGGAGGUUUUACAAAUUUAGAUGGAGGUUUUGUGGUGAACUAGGGUGAUUAU
Stem-loop sequence GUUUUUGAUAUGUUAUAUGGCUGUUCUGAUGUCUAUCAAUGGUGGGUGAAGAUUGCCACCGGAUUAAUUUGAAGCUUGAUCGUCCUUAAUUAGAAAAAUGUUAUUAGUGGGAUCAAGUGGUGUUUUGGAGGUAGAUUUAAACAUUUUGGAGGUGGAUUGAAGCUUUGACUGGACUGAAGUUUAUUGCAUCUGGAGAACAU