| ncRNA ID | osa-miR443 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr3:30021449-30021596 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 38 - AUCACAAUACAAUAAAUCUGGA - 59 |
| Stem-loop(if miRNA) |
--CAU CCC ----AG A A -- A CGUCC AAAAACAAA AAAACU AUGUGAUAUAUC CA UACAAUAAAUCUGGAUAGGAG UCU U ||||| ||||||||| |||||| |||||||||||| || ||||||||||||||||||||| ||| GCAGG UUUUUGUUU UUUUGA UACACUGUAUAG GU AUGUUAUUUAGAUCUAUCUUC AGA C UUUUU AUA CUUAUA G C AU C |
| Stem-loop sequence | CGUCCCAUAAAAACAAACCCAAAACUAGAUGUGAUAUAUCACAAUACAAUAAAUCUGGAUAGGAGUCUAUCCAGAUACUUCUAUCUAGAUUUAUUGUACUGGGAUAUGUCACAUAUAUUCAGUUUUAUAUUUGUUUUUUUUUUGGACG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK061068.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:006-206-C01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015758535.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group expansin-B2 (LOC4349348), mRNA | expansin-B2(LOC4349348) | coding protein | psRNATarget | |||||||||
| CT830230.1 |
|
2.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA049E05, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:15805478
"Cloning and characterization of microRNAs from rice"; Sunkar R, Girke T, Jain PK, Zhu JK; Plant Cell. 17:1397-1411(2005). |