ncRNA ID | novel_zma_miR379 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:146930187-146930254 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089714;SRR1997865;SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 45 - GCUCUCUGCGGAGGCGUGGACGGU - 68 |
Stem-loop(if miRNA) |
--    U     -G   -       G     C   A   GCUC CUGCG  AGG CGUGGAC GUCCG GGC C   |||| |||||  ||| ||||||| ||||| |||   CGAG GACGC  UCC GCACCUG CAGGC CCG A AG    -     GG   A       G     -   G |
Stem-loop sequence | GCUCUCUGCGGAGGCGUGGACGGUCCGCGGCACAGGCCCGGACGGUCCACGACCUGGCGCAGGAGCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT039435.1 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFc0013G13 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001349036.1 |
|
2.5 | Zea mays Protein NRT1/ PTR FAMILY 5.10 (LOC100382172), mRNA | NA | coding protein | psRNATarget |