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BaseInfo

ncRNA ID novel_zma_miR373
Species Zea mays
Class miRNA
Genome position Chr6:161299104-161299196 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711;SRR2089713;SRR2089714;SRR2089715;SRR2287165;SRR2089698;SRR2089699;SRR2089704;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 70 - GGUAAUGGAGUGGAUUGAGGGGGC - 93
Stem-loop(if miRNA) ---          U               C      C     C   A
   GGUAAUGGAG GGAUUGAGGGGGCUA AAUCCC UACUA UUA U
   |||||||||| ||||||||||||||| |||||| ||||| |||
   CCAUUACCUC CCUAACUCCCCCGAU UUAGGG GUGAU AGU U
UUC          C               A      A     A   U
Stem-loop sequence GGUAAUGGAGUGGAUUGAGGGGGCUACAAUCCCCUACUACUUAAUUUUGAAUAGUGAGGGAUUAUAGCCCCCUCAAUCCCCUCCAUUACCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654031.2
ncRNA:24   CGGGGGAGUUAGGUGAGGUAAUGG   1
  ||=||||||||||*|||||||||=
targets:1674   GCUCCCUCAAUCCCCUCCAUUACU   1697

2.5 PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA NA coding protein psRNATarget