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BaseInfo

ncRNA ID	novel_zma_miR370
Species	Zea mays
Class	miRNA
Genome position	Chr6:170157051-170157211 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089698;SRR2089706
Length	24
Mature sequence(if miRNA)	138 - AGGGAAGCUGAAGGAGAAAGGUCA - 161
Stem-loop(if miRNA)	--    ---G  C  UC        G    CGC    --UCACG   U   AA     ---        GCG  UGGAC       CUGA   ACCU    CC UC  GCUUCUCU UGCG   AGAG       AGA GGA  UACCC   UCACUCGG   GC     UGUGAGA    A   ||||    || ||  |||||||| ||||   ||||       ||| |||  |||||   ||||||||   ||     |||||||    A   UGGA    GG AG  CGAAGGGA ACGC   UCUC       UCU CCU  GUGGG   AGUGAGCC   CG     ACGCUCU    G AC    AAGA  A  -U        G    ---    CAAUUUA   -   -C     GAC        --A  ----U       UUGU
Stem-loop sequence	ACCUGCCCUCUCGCUUCUCUGUGCGCGCAGAGUCACGAGAUGGAAAUACCCUCACUCGGGCGGCUGGACUGUGAGACUGAAAGUGUUUCUCGCAUGCACCGAGUGACAGGGGUGCUCCUCUAUUUAACCUCUCGCAGAGGGAAGCUGAAGGAGAAAGGUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054084.1	ncRNA:24   ACUGGAAAGAGGAAGUCGAAGGGA   1   *||||||||||||||||||||||| targets:813   CGACCUUUCUCCUUCAGCUUCCCU   836 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0189I20 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008667405.2	ncRNA:24   ACUGGAAAGAGGAAGUCGAAGGGA   1   *||||||||||||||||||||||| targets:912   CGACCUUUCUCCUUCAGCUUCCCU   935 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103644205 (LOC103644205), mRNA	NA	coding protein	psRNATarget
XM_008676772.2	ncRNA:24   ACUGGAAAGAGGAAGUCGAAGGGA   1   ***||||||*||||||*||||||| targets:26   CUCCCUUUCGCCUUCAUCUUCCCU   49 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 13-like (LOC103651156), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020550461.1	ncRNA:24   ACUGGAAAGAGGAAGUCGAAGGGA   1   ***||||||*||||||*||||||| targets:56   CUCCCUUUCGCCUUCAUCUUCCCU   79 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 13-like (LOC103651156), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020550462.1	ncRNA:24   ACUGGAAAGAGGAAGUCGAAGGGA   1   ***||||||*||||||*||||||| targets:63   CUCCCUUUCGCCUUCAUCUUCCCU   86 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 13-like (LOC103651156), transcript variant X2, mRNA	NA	coding protein	psRNATarget