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BaseInfo

ncRNA ID novel_zma_miR358
Species Zea mays
Class miRNA
Genome position Chr6:129088126-129088189 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - CAUAGCACUCGACAAAGAAGGCAC - 24
Stem-loop(if miRNA) --           A      A   ACACA   
  CAUAGCACUCG CAAAGA GGC     UGGG
  ||||||||||| |||||| |||     |||C
  GUGUUGUGAGC GUUUCU CCG     GCCA
CA           C      -   AAUUG   
Stem-loop sequence CAUAGCACUCGACAAAGAAGGCACACAUGGGCACCGGUUAAGCCUCUUUGCCGAGUGUUGUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239197.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2985353 NA coding protein psRNATarget
JB167528.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2559767 NA coding protein psRNATarget
HI407067.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2074227 NA coding protein psRNATarget