ncRNA ID | osa-miR5486 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:26838891-26838977 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - AGGGGCUUGCAUAUUCUACCA - 31 |
Stem-loop(if miRNA) |
UU   U  -AAA       -   U      CCACCC C    -  AG   GCG UG    GGGGCUU GCA AUUCUA      G UUGA GC  U   ||| ||    ||||||| ||| ||||||      | |||| ||   CGC AC    CUCCGGG CGU UAGGAU      C AACU CG  G GU   C  CUCG       U   U      ------ C    A  CU |
Stem-loop sequence | UUGCGUUGAAAGGGGCUUGCAUAUUCUACCACCCGCUUGAGCAGUGUCGCAUCAACCUAGGAUUUGCUGGGCCUCGCUCCACCGCUG |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |