ncRNA ID | novel_zma_miR338 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:22412137-22412287 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089714;SRR2089715;SRR2287165;SRR4237222;SRR5451003;SRR5451004;SRR2089698;SRR2089701;SRR2089702;SRR2089705;SRR2089707;SRR2089708 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCGAAUGGUGUAGAAGGAAU - 21 |
Stem-loop(if miRNA) |
--C            C  A          C    CC       -    U         C     G AU     C UA    UCUUCUACACCA UC GAUGCAAUUU UUAU  UUUUAUG CAUC UCAGUGGCA AGAAA A  UAGGA A  U    |||||||||||| || |||||||||| ||||  ||||||| |||| ||||||||| ||||| |  ||||| |    GGAAGAUGUGGU AG CUAUGUUAAA AAUG  AAGGUAC GUAG AGUCACCGU UCUUU U  AUUCU U  A UAA            A  C          U    AA       A    C         A     G --     U UA |
Stem-loop sequence | CUCUUCUACACCACUCAGAUGCAAUUUCUUAUCCUUUUAUGCAUCUUCAGUGGCACAGAAAGAAUUAGGACAUAUAAUUUUCUUAUGUUUCUAUGCCACUGACGAUGACAUGGAAAAGUAAUAAAUUGUAUCCGAAUGGUGUAGAAGGAAU |