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BaseInfo

ncRNA ID novel_zma_miR328
Species Zea mays
Class miRNA
Genome position Chr5:43406140-43406205 [-]
Reference genome RefGen_v4
Source SRR2089709
Length 21
Mature sequence(if miRNA) 1 - UCUUUACCGAGUGCUGUGGCC - 21
Stem-loop(if miRNA) --     A       G       GCAC   U G
  CCAUA CACUCGG AAAGAAG    ACC G G
  ||||| ||||||| |||||||    ||| |
  GGUGU GUGAGCC UUUCUUC    UGG C C
CC     C       A       GAAA   C A
Stem-loop sequence CCAUAACACUCGGGAAAGAAGGCACACCUGGGCACCGGUAAAGCUUCUUUACCGAGUGCUGUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406144.1
ncRNA:21   CCGGUGUCGUGAGCCAUUUCU   1
  |||||=|||||||||*|||||
targets:11   GGCCAUAGCACUCGGCAAAGA   31

2.5 Sequence 4269 from Patent EP2074227 NA coding protein psRNATarget
LQ238274.1
ncRNA:21   CCGGUGUCGUGAGCCAUUUCU   1
  |||||=|||||||||*|||||
targets:11   GGCCAUAGCACUCGGCAAAGA   31

2.5 Sequence 4269 from Patent EP2985353 NA coding protein psRNATarget
JB166605.1
ncRNA:21   CCGGUGUCGUGAGCCAUUUCU   1
  |||||=|||||||||*|||||
targets:11   GGCCAUAGCACUCGGCAAAGA   31

2.5 Sequence 4269 from Patent EP2559767 NA coding protein psRNATarget