ncRNA ID | novel_zma_miR323 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:35739696-35739877 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089706;SRR2089708 |
Length | 21 |
Mature sequence(if miRNA) | 162 - AUAUAAUAGGAGUAGGAUGGA - 182 |
Stem-loop(if miRNA) |
--    A      A                            C      A    -GCUAUAAC       UA   UUUCUGACAAGUUUAAA   CAUC UACUCC AUUAUAUGCAAAAUUUCAAGUUCAAAUU GUUAUA UUUA         AAAAAGA  AAA                 U   |||| |||||| |||||||||||||||||||||||||||| |||||| ||||         |||||||  |||   GUAG AUGAGG UAAUAUAUGUUUUAAAGUUCAAGUUUAA CAAUAU AAAU         UUUUUCU  UCG                 U AG    G      A                            A      A    AUACAUUAU       -C   UGAAAUCGGCUAAAAUA |
Stem-loop sequence | CAUCAUACUCCAAUUAUAUGCAAAAUUUCAAGUUCAAAUUCGUUAUAAUUUAGCUAUAACAAAAAGAUAAAAUUUCUGACAAGUUUAAAUUAUAAAAUCGGCUAAAGUGCUCUCUUUUUUAUUACAUAUAAAAUAUAACAAAUUUGAACUUGAAAUUUUGUAUAUAAUAGGAGUAGGAUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008675593.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103649908 (LOC103649908), mRNA | NA | coding protein | psRNATarget |