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BaseInfo

ncRNA ID	novel_zma_miR320
Species	Zea mays
Class	miRNA
Genome position	Chr5:62073710-62073872 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089700;SRR2089701;SRR2089707
Length	24
Mature sequence(if miRNA)	140 - AGAAAACACUCGACGAAGAAGCUC - 163
Stem-loop(if miRNA)	--            A      A                 U     U        A          U              UU   AGAAAACACUCG CGAAGA GCUCUUUGCCGAGUGUU UAUUU UGACACUC GCAAAGAGUU CUUUGCCGAGUGUC  U   |||||||||||| |||||| ||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||  U   UUUUUUGUGAGC GUUUCU CGAGAAACGGCUCACAA AUAAA ACUGUGAG CGUUUCUCGG GAAACGGCUCACAG  U UC            C      -                 C     C        C          -              UU
Stem-loop sequence	AGAAAACACUCGACGAAGAAGCUCUUUGCCGAGUGUUUUAUUUUUGACACUCAGCAAAGAGUUUCUUUGCCGAGUGUCUUUUUUUGACACUCGGCAAAGGGCUCUUUGCCGAGUGUCACAAAUACAACACUCGGCAAAGAGCUCUUUGCCGAGUGUUUUUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT055423.1	ncRNA:24   CUCGAAGAAGCAGCUCACAAAAGA   1   *||=|||||=|||||||||||||| targets:83   AAGUUUCUUUGUCGAGUGUUUUCU   106 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   CUCGAAGAAGCAGCUCACAAAAGA   1   *||=|||||=|||||||||||||| targets:83   AAGUUUCUUUGUCGAGUGUUUUCU   106 Target Full Sequence	1.0	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   CUCGAAGAAGCAGCUCACAAAAGA   1   *||=|||||=|||||||||||||| targets:2102   AAGUUUCUUUGUCGAGUGUUUUCU   2125 Target Full Sequence	1.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   CUCGAAGAAGCAGCUCACAAAAGA   1   *||=|||||=|||||||||||||| targets:2102   AAGUUUCUUUGUCGAGUGUUUUCU   2125 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget