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BaseInfo

ncRNA ID novel_zma_miR307
Species Zea mays
Class miRNA
Genome position Chr10:84061420-84061492 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2287165;SRR2089700;SRR2089708
Length 24
Mature sequence(if miRNA) 50 - CUAGAGGAGGGUGGAUAGGCGGAA - 73
Stem-loop(if miRNA) --       GUUGA       UC       -----    A
  UUGCCUA     CAUUUUU  UUAGGUG     CAUA A
  |||||||     |||||||  |||||||     |||| G
  GGCGGAU     GUGGGAG  GAUCCGC     GUAU U
AA       ---AG       GA       UGAAA    U
Stem-loop sequence UUGCCUAGUUGACAUUUUUUCUUAGGUGCAUAAAGUUUAUGAAAGUCGCCUAGAGGAGGGUGGAUAGGCGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952213.1
ncRNA:24   AAGGCGGAUAGGUGGGAGGAGAUC   1
  ||=|||||||||||||*|||||||
targets:1217   UUUCGCCUAUCCACCCCCCUCUAG   1240

1.5 Zea mays clone 1226497 hypothetical protein mRNA, complete cds NA coding protein psRNATarget