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BaseInfo

ncRNA ID	novel_zma_miR306
Species	Zea mays
Class	miRNA
Genome position	Chr5:155266388-155266490 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR5451004;SRR5451005;SRR5451006;SRR2089704;SRR2089707
Length	24
Mature sequence(if miRNA)	1 - ACCGGACUGUCUGGUGGGUGGCAC - 24
Stem-loop(if miRNA)	--   --    G     U        AUUUAUAG     --ACUA    A    U   GCU  CCGC CAGAC GUCCGGUG        CCAGC      GCUG UUUU C   |||  |||| ||||| ||||||||        |||||      |||| ||||   CGG  GGUG GUCUG CAGGCCAC        GGUUG      CGAC AGAG C CA   UG    -     U        --GUGCCA     GUUCCC    G    C
Stem-loop sequence	GCUCCGCGCAGACUGUCCGGUGAUUUAUAGCCAGCACUAGCUGAUUUUUCCCGAGAGCAGCCCCUUGGUUGGACCGUGCACCGGACUGUCUGGUGGGUGGCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ101438.1	ncRNA:24   CACGGUGGGUGGUCUGUCAGGCCA   1   ||||-||*|||||||||||||||| targets:37   GUGC-ACGCACCAGACAGUCCGGU   59 Target Full Sequence	1.0	TSA: Zea mays contig37094, mRNA sequence	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:24   CACGGUGGGUGGUCUGUCAGGCCA   1   |||--=||||||=||||||||||| targets:31   GUG--GCCCACCGGACAGUCCGGU   52 Target Full Sequence	2.5	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
JB170393.1	ncRNA:24   CACGGUGGGUGGUCUGUCAGGCCA   1   |||--=||||||=||||||||||| targets:31   GUG--GCCCACCGGACAGUCCGGU   52 Target Full Sequence	2.5	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
HI409932.1	ncRNA:24   CACGGUGGGUGGUCUGUCAGGCCA   1   |||--=||||||=||||||||||| targets:31   GUG--GCCCACCGGACAGUCCGGU   52 Target Full Sequence	2.5	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
U41079.1	ncRNA:24   CACGGUGGGUGGUCUGUCAGGCCA   1   |||--||=||||=||||||||||| targets:26   GUG--ACUCACCGGACAGUCCGGU   47 Target Full Sequence	2.5	Zea mays copia-type retroelement PREM-2, partial sequence	NA	coding protein	psRNATarget
BT086229.2	ncRNA:24   CACGGUGGGUGGUCUGUCAGGCCA   1   |||--|*|||||=||||||||||| targets:649   GUG--AACCACCGGACAGUCCGGU   670 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget