ncRNA ID | novel_zma_miR305 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:175915772-175915817 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR1583944;SRR2089715;SRR2287159;SRR2287160;SRR2287161;SRR2287162;SRR2287163;SRR1583942;SRR1997866;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089706;SRR2089707;SRR2089708 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGAACACACUGAUUUUCUGGGC - 22 |
Stem-loop(if miRNA) |
--         UG   --GG   C   CCGGAAAGU  GUG    CAG C   |||||||||  |||    |||   GGUCUUUUA  CAC    GUU A CG         GU   ACAA   G |
Stem-loop sequence | CCGGAAAGUUGGUGGGCAGCCAGUUGAACACACUGAUUUUCUGGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU964271.1 |
|
2.5 | Zea mays clone 277471 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU965108.1 |
|
2.5 | Zea mays clone 283859 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT064789.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0135G11 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001175304.1 |
|
2.5 | Zea mays uncharacterized LOC100382572 (cl38706_1), mRNA | NA | coding protein | psRNATarget |