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BaseInfo

ncRNA ID novel_zma_miR304
Species Zea mays
Class miRNA
Genome position Chr5:188595331-188595418 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089712;SRR2089713;SRR2089715;SRR2287159;SRR2287161;SRR2287162;SRR2287165;SRR4237220;SRR4237224;SRR4237225;SRR4237226;SRR4237227;SRR5105963;SRR5451003;SRR5451004;SRR2089701;SRR2089704
Length 23
Mature sequence(if miRNA) 1 - UGCUCACUGCUCUAUCUGUCACC - 23
Stem-loop(if miRNA) --       -    -         A      G CGGA       CGG
  UGACAGA AGAG AGUGAGCAC CGGCCG G    ACGGCAC   C
  ||||||| |||| ||||||||| |||||| |    |||||||
  ACUGUCU UCUC UCACUCGUG GCCGGC C    UGCCGUG   G
CC       A    G         C      G ----       UAG
Stem-loop sequence UGACAGAAGAGAGUGAGCACACGGCCGGGCGGAACGGCACCGGCGGAUGUGCCGUCGCGGCCGCGUGCUCACUGCUCUAUCUGUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI408583.1
ncRNA:23   CC-ACUGUCUAUCUCGUCACUCGU   1
  ||-|||||||*||||*||||||||
targets:7   GGCUGACAGAAAGAGAAGUGAGCA   30

2.5 Sequence 6708 from Patent EP2074227 NA coding protein psRNATarget
LQ240713.1
ncRNA:23   CC-ACUGUCUAUCUCGUCACUCGU   1
  ||-|||||||*||||*||||||||
targets:7   GGCUGACAGAAAGAGAAGUGAGCA   30

2.5 Sequence 6708 from Patent EP2985353 NA coding protein psRNATarget
JB169044.1
ncRNA:23   CC-ACUGUCUAUCUCGUCACUCGU   1
  ||-|||||||*||||*||||||||
targets:7   GGCUGACAGAAAGAGAAGUGAGCA   30

2.5 Sequence 6708 from Patent EP2559767 NA coding protein psRNATarget