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BaseInfo

ncRNA ID novel_zma_miR300
Species Zea mays
Class miRNA
Genome position Chr4:30340464-30340547 [+]
Reference genome RefGen_v4
Source SRR1583943
Length 24
Mature sequence(if miRNA) 1 - ACUUCCUCCGUUUCUUUUUAGUUG - 24
Stem-loop(if miRNA) --        C     U                     U  A
  ACUUCCUC GUUUC UUUUAGUUGUCGCUGGAUAGU CA A
  |||||||| ||||| ||||||||||||||||||||| ||
  UGAGGGAG CAAAG AAAAUUAACAGCGACCUAUCA GU U
GA        A     C                     C  U
Stem-loop sequence ACUUCCUCCGUUUCUUUUUAGUUGUCGCUGGAUAGUUCAAAUUUGCACUAUCCAGCGACAAUUAAAACGAAACAGAGGGAGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241364.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||||||
targets:62   CAACUAAAAAGAAACGGAGGAAGU   85

0.0 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
HI409234.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||||||
targets:62   CAACUAAAAAGAAACGGAGGAAGU   85

0.0 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
JB169695.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||||||
targets:62   CAACUAAAAAGAAACGGAGGAAGU   85

0.0 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
JB167691.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:65   CAACUAAAAAGAAACGGAGGGAGU   88

1.5 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
HI407230.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:65   CAACUAAAAAGAAACGGAGGGAGU   88

1.5 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:65   CAACUAAAAAGAAACGGAGGGAGU   88

1.5 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
BT062468.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:630   CAACUAAAAAGAAACGGAGGGAGU   653

1.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
XM_008656230.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:46   CAACUAAAAAGAAACGGAGGGAGU   69

1.5 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:1221   CAACUAAAAAGAAACGGAGGGAGU   1244

1.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:1574   CAACUAAAAAGAAACGGAGGGAGU   1597

1.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:1574   CAACUAAAAAGAAACGGAGGGAGU   1597

1.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:1210   CAACUAAAAAGAAACGGAGGGAGU   1233

1.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||=|||
targets:2587   CAACUAAAAAGAAACGGAGGGAGU   2610

1.5 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008667486.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||||||||||||||||||||*|||
targets:1391   CAACUAAAAAGAAACGGAGGUAGU   1414

1.5 PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA NA coding protein psRNATarget
JB170160.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAGUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
JB169079.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
JB170422.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
JB169406.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI409699.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAGUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241075.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
LQ242145.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
HI410015.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
LQ240748.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAGUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ242091.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI408945.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB170476.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:63   CAAAUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
JB163748.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:70   CAACUAAAAUGAAACGGAGGGAGU   93

2.5 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
HI403287.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:70   CAACUAAAAUGAAACGGAGGGAGU   93

2.5 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:70   CAACUAAAAUGAAACGGAGGGAGU   93

2.5 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
EZ067019.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:6   CAAAUAAAAAGAAACGGAGGGAGU   29

1.5 TSA: Zea mays contig02653, mRNA sequence NA coding protein psRNATarget
JB167780.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:230   CAACUAAAACGAAACGGAGGGAGU   253

2.5 Sequence 5444 from Patent EP2559767 NA coding protein psRNATarget
LQ239449.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:230   CAACUAAAACGAAACGGAGGGAGU   253

2.5 Sequence 5444 from Patent EP2985353 NA coding protein psRNATarget
HI407319.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:230   CAACUAAAACGAAACGGAGGGAGU   253

2.5 Sequence 5444 from Patent EP2074227 NA coding protein psRNATarget
EU964901.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:556   CAAAUAAAAAGAAACGGAGGGAGU   579

1.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
EU952378.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:772   CAACUAAAACGAAACGGAGGGAGU   795

2.5 Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:628   CAAAUAAAAAGAAACGGAGGGAGU   651

1.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:628   CAAAUAAAAAGAAACGGAGGGAGU   651

1.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT060817.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:289   CAAAUAAAAAGAAACGGAGGGAGU   312

1.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
BT065083.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:265   CAACUAAAACGAAACGGAGGGAGU   288

2.5 Zea mays full-length cDNA clone ZM_BFb0081B22 mRNA, complete cds NA coding protein psRNATarget
BT062074.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1196   CAACUAAAAUGAAACGGAGGGAGU   1219

2.5 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
EU953599.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1284   CAACUAAAAUGAAACGGAGGGAGU   1307

2.5 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1279   CAACUAAAAUGAAACGGAGGGAGU   1302

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1294   CAACUAAAAUGAAACGGAGGGAGU   1317

2.5 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1225   CAAAUAAAAAGAAACGGAGGGAGU   1248

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1347   CAAAUAAAAAGAAACGGAGGGAGU   1370

1.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1347   CAAAUAAAAAGAAACGGAGGGAGU   1370

1.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1308   CAACUAAAAUGAAACGGAGGGAGU   1331

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:200   CAAAUAAAAAGAAACGGAGGGAGU   223

1.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1360   CAACUAAAAUGAAACGGAGGGAGU   1383

2.5 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1362   CAACUAAAAUGAAACGGAGGGAGU   1385

2.5 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1414   CAAAUAAAAAGAAACGGAGGGAGU   1437

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1331   CAAAUAAAAAGAAACGGAGGGAGU   1354

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:1468   CAACUAAAAUGAAACGGAGGGAGU   1491

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
BT043433.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1404   CAAAUAAAAAGAAACGGAGGGAGU   1427

1.5 Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1586   CAAAUAAAAAGAAACGGAGGGAGU   1609

1.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:24   GUUGAUU---UUUCUUUGCCUCCUUCA   1
  |=|||||---|||||||||||||||||
targets:237   CGACUAAUAAAAAGAAACGGAGGAAGU   263

3.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1602   CAAAUAAAAAGAAACGGAGGGAGU   1625

1.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
BT066708.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:158   CAACUAAAACGAAACGGAGGGAGU   181

2.5 Zea mays full-length cDNA clone ZM_BFb0054D21 mRNA, complete cds NA coding protein psRNATarget
EU957018.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:2059   CAAAUAAAAAGAAACGGAGGGAGU   2082

1.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2057   CAACUAAAAUGAAACGGAGGGAGU   2080

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2088   CAACUAAAAUGAAACGGAGGGAGU   2111

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2170   CAACUAAAAUGAAACGGAGGGAGU   2193

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2201   CAACUAAAAUGAAACGGAGGGAGU   2224

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:2555   CAAAUAAAAAGAAACGGAGGGAGU   2578

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:2494   CAAAUAAAAAGAAACGGAGGGAGU   2517

1.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:1522   CAAAUAAAAAGAAACGGAGGGAGU   1545

1.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:2855   CAAAUAAAAAGAAACGGAGGGAGU   2878

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:2872   CAAAUAAAAAGAAACGGAGGGAGU   2895

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:2978   CAAAUAAAAAGAAACGGAGGGAGU   3001

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669143.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2800   CAACUAAAACGAAACGGAGGGAGU   2823

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2730   CAACUAAAACGAAACGGAGGGAGU   2753

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2862   CAACUAAAACGAAACGGAGGGAGU   2885

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2278   CAACUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||||||||||||=|||
targets:3757   CAAAUAAAAAGAAACGGAGGGAGU   3780

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2278   CAACUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2278   CAACUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2299   CAACUAAAACGAAACGGAGGGAGU   2322

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2299   CAACUAAAACGAAACGGAGGGAGU   2322

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2299   CAACUAAAACGAAACGGAGGGAGU   2322

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2278   CAACUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2237   CAACUAAAACGAAACGGAGGGAGU   2260

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2292   CAACUAAAACGAAACGGAGGGAGU   2315

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2317   CAACUAAAACGAAACGGAGGGAGU   2340

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:3240   CAACUAAAACGAAACGGAGGGAGU   3263

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547478.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:3240   CAACUAAAACGAAACGGAGGGAGU   3263

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2278   CAACUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||||||||*||||||||||=|||
targets:2216   CAACUAAAACGAAACGGAGGGAGU   2239

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
LQ241224.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:60   CAAUUAAAACGAAACGGAGGGAGU   83

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
HI409094.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:60   CAAUUAAAACGAAACGGAGGGAGU   83

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
JB169555.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:60   CAAUUAAAACGAAACGGAGGGAGU   83

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
EZ061772.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  =||-||||||||||||||||||||
targets:244   UAA-UAAAAAGAAACGGAGGAAGU   266

0.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
BT068381.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1168   CAAUUAAAACGAAACGGAGGGAGU   1191

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1121   CAAUUAAAACGAAACGGAGGGAGU   1144

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1227   CAAUUAAAACGAAACGGAGGGAGU   1250

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1261   CAAUUAAAACGAAACGGAGGGAGU   1284

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1280   CAAUUAAAACGAAACGGAGGGAGU   1303

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1461   CAAUUAAAACGAAACGGAGGGAGU   1484

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1461   CAAUUAAAACGAAACGGAGGGAGU   1484

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||=|||||*||||||||||=|||
targets:1325   CAAUUAAAACGAAACGGAGGGAGU   1348

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
JB167766.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||*|||||||||||||||||=||*
targets:65   CAUCUAAAAAGAAACGGAGGGAGG   88

2.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
HI407305.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||*|||||||||||||||||=||*
targets:65   CAUCUAAAAAGAAACGGAGGGAGG   88

2.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
LQ239435.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||*|||||||||||||||||=||*
targets:65   CAUCUAAAAAGAAACGGAGGGAGG   88

2.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
EU968044.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||*|||||||||||||||||=||*
targets:1083   CAUCUAAAAAGAAACGGAGGGAGG   1106

2.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  ||*|||||||||||||||||=||*
targets:971   CAUCUAAAAAGAAACGGAGGGAGG   994

2.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  =||-||||||||||||||||=|||
targets:1144   UAA-UAAAAAGAAACGGAGGGAGU   1166

1.5 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
BT037092.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  =||-||||||||||||||||=|||
targets:1144   UAA-UAAAAAGAAACGGAGGGAGU   1166

1.5 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
XM_020544903.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  =||-||||||||||||||||=|||
targets:3201   UAA-UAAAAAGAAACGGAGGGAGU   3223

1.5 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  =||-||||||||||||||||=|||
targets:3210   UAA-UAAAAAGAAACGGAGGGAGU   3232

1.5 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
JB170657.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
HI408710.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB169171.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI409328.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*|||||*||||||||||=|||
targets:63   CAAAUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
NM_001175535.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||*=||||||||||||
targets:1596   CAAAUAAAAAAGAACGGAGGAAGU   1619

2.5 Zea mays uncharacterized LOC100382838 (LOC100382838), mRNA NA coding protein psRNATarget
BT065511.1
ncRNA:24   GUUGAUUUUUCUUUGCCUCCUUCA   1
  |||*||||||*=||||||||||||
targets:1596   CAAAUAAAAAAGAACGGAGGAAGU   1619

2.5 Zea mays full-length cDNA clone ZM_BFb0202I04 mRNA, complete cds NA coding protein psRNATarget
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