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BaseInfo

ncRNA ID	novel_zma_miR293
Species	Zea mays
Class	miRNA
Genome position	Chr5:219583693-219583778 [-]
Reference genome	RefGen_v4
Source	SRR2089709
Length	21
Mature sequence(if miRNA)	66 - CCAGAGGGGGAUUGGAGGGGA - 86
Stem-loop(if miRNA)	--                                C     CAU   CCAGAGGGGGAUUGGAGGGGAUUAAAUCCUUU CUAGU   U   |||||||||||||||||||||||||||||||| |||||   GGUCUCUCCCUAAUCUCCCCUAAUUUAGGGGA GAUCA   U UA                                A     UUU
Stem-loop sequence	CCAGAGGGGGAUUGGAGGGGAUUAAAUCCUUUCCUAGUCAUUUUUUACUAGAAGGGGAUUUAAUCCCCUCUAAUCCCUCUCUGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ049235.1	ncRNA:21   AGGGGAGGUUAGGGGGAGACC   1   ||||||=||||||||=||||| targets:1   UCCCCUUCAAUCCCCUUCUGG   21 Target Full Sequence	2.5	TSA: Zea mays contig50353, mRNA sequence	NA	coding protein	psRNATarget
XM_020540164.1	ncRNA:21   AGGGGAGGUUAGGGGGAGACC   1   *|||||||||||||||||||| targets:1604   ACCCCUCCAAUCCCCCUCUGG   1624 Target Full Sequence	0.0	PREDICTED: Zea mays Cysteine-rich repeat secretory protein 3 (LOC107521955), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI403028.1	ncRNA:21   AGGGGAGGUUAGGGGGAGACC   1   *||||||||||||||*||||| targets:84   ACCCCUCCAAUCCCCAUCUGG   104 Target Full Sequence	1.5	Sequence 1153 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235158.1	ncRNA:21   AGGGGAGGUUAGGGGGAGACC   1   *||||||||||||||*||||| targets:84   ACCCCUCCAAUCCCCAUCUGG   104 Target Full Sequence	1.5	Sequence 1153 from Patent EP2985353	NA	coding protein	psRNATarget
JB163489.1	ncRNA:21   AGGGGAGGUUAGGGGGAGACC   1   *||||||||||||||*||||| targets:84   ACCCCUCCAAUCCCCAUCUGG   104 Target Full Sequence	1.5	Sequence 1153 from Patent EP2559767	NA	coding protein	psRNATarget
EU957179.1	ncRNA:21   AGGGGAGGUUAGGGGGAGACC   1   **|*||||||||||||||||| targets:1564   GGCACUCCAAUCCCCCUCUGG   1584 Target Full Sequence	1.0	Zea mays clone 1584995 mRNA sequence	NA	coding protein	psRNATarget