ncRNA ID | novel_zma_miR288 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:214039662-214039717 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2287031;SRR2287159;SRR2287160;SRR2287161;SRR2287162;SRR2287163;SRR2287164;SRR2287165;SRR5451004;SRR5451005;SRR2089699;SRR2089700;SRR2089702;SRR2089703;SRR2089705;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAUGCGGAUACGAAAACGGGAG - 24 |
Stem-loop(if miRNA) |
--      --    U    AA        G   AAAAUG  CGGA ACGA  ACGGGAGA G   ||||||  |||| ||||  ||||||||   UUUUAC  GCCU UGCU  UGUCUUUU A AC      CU    U    --        G |
Stem-loop sequence | AAAAUGCGGAUACGAAAACGGGAGAGGAGUUUUCUGUUCGUUUCCGUCCAUUUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020543912.1 |
|
2.5 | PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA | NA | coding protein | psRNATarget |