Search result

BaseInfo

ncRNA ID	novel_zma_miR258
Species	Zea mays
Class	miRNA
Genome position	Chr4:94009661-94009741 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089713;SRR2089714;SRR2089700;SRR2089701;SRR2089704;SRR2089708
Length	24
Mature sequence(if miRNA)	58 - ACGGGUAUGGGUUUUUUAGCGGGC - 81
Stem-loop(if miRNA)	--        -U     AA     -C           -   G   CCGUUGGG  ACCCG  ACCCG  AUGGGUAUGGG UUU G   ||||||||  |||||  |||||  ||||||||||| ||| G   GGCGAUUU  UGGGU  UGGGC  UGCCCAUAUUU AAA C CG        UU     -A     AC           U   A
Stem-loop sequence	CCGUUGGGUACCCGAAACCCGCAUGGGUAUGGGUUUGGGCAAAAUUUUAUACCCGUCACGGGUAUGGGUUUUUUAGCGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT042623.2	ncRNA:24   CGGGCGAUUUUUUGGGUAUGGGCA   1   *|||*=||||||||||=||||||| targets:322   ACCCAUUAAAAAACCCGUACCCGU   345 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0377K06 mRNA, complete cds	NA	coding protein	psRNATarget
LQ238102.1	ncRNA:24   CGGGCGAUUUUUUGGGUAUGGGCA   1   ||||*=||||||||||||||||*| targets:43   GCCCAUUAAAAAACCCAUACCCAU   66 Target Full Sequence	2.5	Sequence 4097 from Patent EP2985353	NA	coding protein	psRNATarget
JB166433.1	ncRNA:24   CGGGCGAUUUUUUGGGUAUGGGCA   1   ||||*=||||||||||||||||*| targets:43   GCCCAUUAAAAAACCCAUACCCAU   66 Target Full Sequence	2.5	Sequence 4097 from Patent EP2559767	NA	coding protein	psRNATarget
HI405972.1	ncRNA:24   CGGGCGAUUUUUUGGGUAUGGGCA   1   ||||*=||||||||||||||||*| targets:43   GCCCAUUAAAAAACCCAUACCCAU   66 Target Full Sequence	2.5	Sequence 4097 from Patent EP2074227	NA	coding protein	psRNATarget