ncRNA ID | osa-miR2880 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:22741618-22741797 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - ACGGUAUCCCGUUCGGACAGGAUG - 34 |
Stem-loop(if miRNA) |
       A       A            A       A C  A         U         AG  ---------AU      ACCUAGUAGGUA AUGCUAC GGACGGU UCCCGUUCGGAC GGAUGAU C UC GAGGUAUCG CUGAUACCC  GU           GCCAAU            U ||||||| ||||||| |||||||||||| ||||||| | || ||||||||| |||||||||  ||           ||||||            U UACGAUG CCUGCCA AGGGCAAGUCUG CCUACUA G AG UUCCAUAGC GACUAUGGG  CA           CUAUGG            G        C       A            C       - U  A         C         -G  AACCUGUACUA      AGUUCCAUAGCG |
Stem-loop sequence | AUGCUACAGGACGGUAUCCCGUUCGGACAGGAUGAUACCUCAGAGGUAUCGUCUGAUACCCAGGUAUGCCAAUACCUAGUAGGUAUUGGCGAUACCUUGAGGUAUCAUCAUGUCCAAACGGGGUAUCAGCCGAUACCUUAGAUGAUCAUCCCGUCUGAACGGGAAACCGUCCCGUAGCAU |
1 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |