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BaseInfo

ncRNA ID	novel_zma_miR246
Species	Zea mays
Class	miRNA
Genome position	Chr4:203356872-203356952 [-]
Reference genome	RefGen_v4
Source	SRR1583943;SRR2647386
Length	24
Mature sequence(if miRNA)	58 - ACCGCCACUAGAAAUCGUAUUUCC - 81
Stem-loop(if miRNA)	--                  --    CC          CUA   ACCGCCACUAGAAAUCGU  AUUU  ACAAGCGGUU   U   ||||||||||||||||||  ||||  ||||||||||   A   UGGUGGUGAUCUUUAGUA  UAAA  UGUUCGCCAA   A UU                  CC    AA          AAG
Stem-loop sequence	ACCGCCACUAGAAAUCGUAUUUCCACAAGCGGUUCUAUAAGAAAACCGCUUGUAAAAAUCCAUGAUUUCUAGUGGUGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235215.1	ncRNA:24   CCUUUAUGCUAAAGAUCACCGCCA   1   *||||||=|||||||||||*|||| targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96 Target Full Sequence	2.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget
JB163546.1	ncRNA:24   CCUUUAUGCUAAAGAUCACCGCCA   1   *||||||=|||||||||||*|||| targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96 Target Full Sequence	2.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
HI403085.1	ncRNA:24   CCUUUAUGCUAAAGAUCACCGCCA   1   *||||||=|||||||||||*|||| targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96 Target Full Sequence	2.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget
HI403012.1	ncRNA:24   CCUUUAUGCUAAAGAUCACCGCCA   1   **|||*|=|||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.0	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:24   CCUUUAUGCUAAAGAUCACCGCCA   1   **|||*|=|||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.0	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget
JB163473.1	ncRNA:24   CCUUUAUGCUAAAGAUCACCGCCA   1   **|||*|=|||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.0	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
JB163558.1	ncRNA:23   CU-UUAUGCUAAAGAUCACCGCCA   1   ||-||*|=|||||||||||||||| targets:1   GAUAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.0	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
HI403097.1	ncRNA:23   CU-UUAUGCUAAAGAUCACCGCCA   1   ||-||*|=|||||||||||||||| targets:1   GAUAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.0	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:23   CU-UUAUGCUAAAGAUCACCGCCA   1   ||-||*|=|||||||||||||||| targets:1   GAUAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.0	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget