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BaseInfo

ncRNA ID novel_zma_miR243
Species Zea mays
Class miRNA
Genome position Chr4:36530329-36530391 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089713;SRR2287031;SRR2287160;SRR1997865;SRR5451005;SRR5451006;SRR1997866;SRR2089698;SRR2089699;SRR2089702;SRR2089703;SRR2089705
Length 24
Mature sequence(if miRNA) 1 - GUAUUUUGGAAUGAGUGGAUGACG - 24
Stem-loop(if miRNA) --      G   G         A    GUCGC
  UCGUCC AUU AUUUCGAGG AUGG     G
  |||||| ||| ||||||||| ||||
  AGUAGG UGA UAAGGUUUU UGUC     G
GC      -   G         A    AAAUU
Stem-loop sequence UCGUCCGAUUGAUUUCGAGGAAUGGGUCGCGGUUAAACUGUAUUUUGGAAUGAGUGGAUGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550362.1
ncRNA:24   GCAGUAGGUGAGUAAGGUUUUAUG   1
  ||||||||||||=|||||||||||
targets:694   CGUCAUCCACUCGUUCCAAAAUAC   717

1.5 PREDICTED: Zea mays protein ALP1-like (LOC103650735), mRNA NA coding protein psRNATarget