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BaseInfo

ncRNA ID novel_zma_miR233
Species Zea mays
Class miRNA
Genome position Chr4:87069160-87069279 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089713;SRR2089715;SRR4237221;SRR4237223;SRR1997865;SRR4237224;SRR4237226;SRR5105963;SRR5451003;SRR5451004;SRR1997866;SRR2089701;SRR2089704
Length 21
Mature sequence(if miRNA) 100 - CUGACAGAAGAGAGUGAGCAC - 120
Stem-loop(if miRNA) --        -     -        A      G   A        ---A   -  C   AU   
  CUGACAGA AGAGA GUGAGCAC CAGCGG CAG CUGCAUCG    UCG AU UGC  CCGA
  |||||||| ||||| |||||||| |||||| ||| ||||||||    ||| || |||  |||G
  GACUGUCU UCUCU CACUCGUG GUCGUC GUC GACGUAGU    AGC UG ACG  GGCA
CU        C     U        C      -   -        AGUA   A  C   -C   
Stem-loop sequence CUGACAGAAGAGAGUGAGCACACAGCGGGCAGACUGCAUCGAUCGAUCUGCAUCCGAGACGGCGCACGUACGAAUGAUGAUGCAGCUGCUGCUGCGUGCUCACUUCUCUCUCUGUCAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169044.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||||||||||||||||*
targets:74   GUGCUCACUCUCUUCUGUCAA   94

1.0 Sequence 6708 from Patent EP2559767 NA coding protein psRNATarget
HI408583.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||||||||||||||||*
targets:74   GUGCUCACUCUCUUCUGUCAA   94

1.0 Sequence 6708 from Patent EP2074227 NA coding protein psRNATarget
LQ240713.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||||||||||||||||*
targets:74   GUGCUCACUCUCUUCUGUCAA   94

1.0 Sequence 6708 from Patent EP2985353 NA coding protein psRNATarget
JB170377.1
ncRNA:21   CACGAGUGAGAGA-AGACAGUC   1
  |||||||||||||-||||||||
targets:74   GUGCUCACUCUCUAUCUGUCAG   95

3.0 Sequence 8041 from Patent EP2559767 NA coding protein psRNATarget
JB170378.1
ncRNA:21   CACGAGUGAGAGA-AGACAGUC   1
  |||||||||||||-||||||||
targets:74   GUGCUCACUCUCUAUCUGUCAG   95

3.0 Sequence 8042 from Patent EP2559767 NA coding protein psRNATarget
HI409916.1
ncRNA:21   CACGAGUGAGAGA-AGACAGUC   1
  |||||||||||||-||||||||
targets:74   GUGCUCACUCUCUAUCUGUCAG   95

3.0 Sequence 8041 from Patent EP2074227 NA coding protein psRNATarget
LQ242046.1
ncRNA:21   CACGAGUGAGAGA-AGACAGUC   1
  |||||||||||||-||||||||
targets:74   GUGCUCACUCUCUAUCUGUCAG   95

3.0 Sequence 8041 from Patent EP2985353 NA coding protein psRNATarget
HI409917.1
ncRNA:21   CACGAGUGAGAGA-AGACAGUC   1
  |||||||||||||-||||||||
targets:74   GUGCUCACUCUCUAUCUGUCAG   95

3.0 Sequence 8042 from Patent EP2074227 NA coding protein psRNATarget
LQ242047.1
ncRNA:21   CACGAGUGAGAGA-AGACAGUC   1
  |||||||||||||-||||||||
targets:74   GUGCUCACUCUCUAUCUGUCAG   95

3.0 Sequence 8042 from Patent EP2985353 NA coding protein psRNATarget
EZ086842.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:43   GUGCUCUCUCUCUUCUGUCAG   63

1.0 TSA: Zea mays contig22488, mRNA sequence NA coding protein psRNATarget
AY107331.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:127   GUGCUCUCUCUCUUCUGUCAG   147

1.0 Zea mays PCO114323 mRNA sequence NA coding protein psRNATarget
XM_008682670.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:374   GUGCUCUCUCUCUUCUGUCAG   394

1.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 11 (LOC103656018), mRNA NA coding protein psRNATarget
BT088183.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:826   GUGCUCUCUCUCUUCUGUCAG   846

1.0 Zea mays full-length cDNA clone ZM_BFc0047E05 mRNA, complete cds NA coding protein psRNATarget
KJ727979.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1070   GUGCUCUCUCUCUUCUGUCAG   1090

1.0 Zea mays clone pUT6094 SBP transcription factor (SBP25) mRNA, partial cds NA coding protein psRNATarget
XM_020543213.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:788   GUGCUCUCUCUCUUCUGUCAG   808

1.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 2 (LOC103637478), mRNA NA coding protein psRNATarget
KU131572.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1000   GUGCUCUCUCUCUUCUGUCAG   1020

1.0 Zea mays cultivar B73 squamosa promoter binding-like protein (Tga1) mRNA, complete cds NA coding protein psRNATarget
KU131571.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1014   GUGCUCUCUCUCUUCUGUCAG   1034

1.0 Zea mays cultivar B73 squamosa promoter binding-like protein (Not1) mRNA, complete cds NA coding protein psRNATarget
AY883560.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:993   GUGCUCUCUCUCUUCUGUCAG   1013

1.0 Zea mays cultivar inbred line W22 teosinte glume architecture 1 (tga1) mRNA, complete cds NA coding protein psRNATarget
BT035779.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:947   GUGCUCUCUCUCUUCUGUCAG   967

1.0 Zea mays full-length cDNA clone ZM_BFb0083B18 mRNA, complete cds NA coding protein psRNATarget
NM_001138620.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:947   GUGCUCUCUCUCUUCUGUCAG   967

1.0 Zea mays Squamosa promoter-binding-like protein 2 (pco114323), mRNA NA coding protein psRNATarget
XM_008678337.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:855   GUGCUCUCUCUCUUCUGUCAG   875

1.0 PREDICTED: Zea mays Squamosa promoter-binding-like protein 2 (pco114323), transcript variant X1, mRNA NA coding protein psRNATarget
EU965000.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:960   GUGCUCUCUCUCUUCUGUCAG   980

1.0 Zea mays clone 283067 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008645498.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1252   GUGCUCUCUCUCUUCUGUCAG   1272

1.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 11 (SBP25), transcript variant X4, mRNA NA coding protein psRNATarget
EU964361.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1203   GUGCUCUCUCUCUUCUGUCAG   1223

1.0 Zea mays clone 278288 mRNA sequence NA coding protein psRNATarget
XM_008645496.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1353   GUGCUCUCUCUCUUCUGUCAG   1373

1.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 11 (SBP25), transcript variant X2, mRNA NA coding protein psRNATarget
EU969824.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1353   GUGCUCUCUCUCUUCUGUCAG   1373

1.0 Zea mays clone 336108 squamosa promoter-binding-like protein 11 mRNA, complete cds NA coding protein psRNATarget
XM_008680176.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1248   GUGCUCUCUCUCUUCUGUCAG   1268

1.0 PREDICTED: Zea mays teosinte glume architecture 1-like (LOC103653214), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001156062.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1402   GUGCUCUCUCUCUUCUGUCAG   1422

1.0 Zea mays squamosa promoter-binding-like protein 11 (SBP25), mRNA NA coding protein psRNATarget
EU963637.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1402   GUGCUCUCUCUCUUCUGUCAG   1422

1.0 Zea mays clone 265056 squamosa promoter-binding-like protein 11 mRNA, complete cds NA coding protein psRNATarget
XM_008645497.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1418   GUGCUCUCUCUCUUCUGUCAG   1438

1.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 11 (SBP25), transcript variant X3, mRNA NA coding protein psRNATarget
EU973300.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1462   GUGCUCUCUCUCUUCUGUCAG   1482

1.0 Zea mays clone 396397 mRNA sequence NA coding protein psRNATarget
XM_008645495.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1669   GUGCUCUCUCUCUUCUGUCAG   1689

1.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 11 (SBP25), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008680174.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:1586   GUGCUCUCUCUCUUCUGUCAG   1606

1.0 PREDICTED: Zea mays teosinte glume architecture 1-like (LOC103653213), mRNA NA coding protein psRNATarget
XM_008676419.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*||||||||||||||
targets:2221   GUGCUCUCUCUCUUCUGUCAG   2241

1.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 2 (LOC103650833), mRNA NA coding protein psRNATarget
JC611929.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:632   GUGCUCUCUCUCUUCUGUCAU   652

2.0 Sequence 91 from Patent WO2014106838 NA coding protein psRNATarget
HQ858690.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:755   GUGCUCUCUCUCUUCUGUCAU   775

2.0 Zea mays clone UT1146 SBP transcription factor mRNA, partial cds NA coding protein psRNATarget
HQ858786.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*||||||||||||||
targets:740   AUGCUCUCUCUCUUCUGUCAG   760

1.0 Zea mays clone UT1800 SBP transcription factor mRNA, partial cds NA coding protein psRNATarget
EU947023.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:284   GUGCUCUCUCUCUUCUGUCAA   304

2.0 Zea mays clone 326226 mRNA sequence NA coding protein psRNATarget
HQ858679.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:764   GUGCUCUCUCUCUUCUGUCAA   784

2.0 Zea mays clone UT1135 SBP transcription factor mRNA, partial cds NA coding protein psRNATarget
KJ726823.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:779   GUGCUCUCUCUCUUCUGUCAA   799

2.0 Zea mays clone pUT3362 SBP transcription factor (SBP23) mRNA, partial cds NA coding protein psRNATarget
NM_001143577.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:591   GUGCUCUCUCUCUUCUGUCAU   611

2.0 Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100217221), mRNA NA coding protein psRNATarget
BT038156.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:591   GUGCUCUCUCUCUUCUGUCAU   611

2.0 Zea mays full-length cDNA clone ZM_BFb0214P19 mRNA, complete cds NA coding protein psRNATarget
BT065275.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:907   GUGCUCUCUCUCUUCUGUCAU   927

2.0 Zea mays full-length cDNA clone ZM_BFb0077F03 mRNA, complete cds NA coding protein psRNATarget
HQ858696.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:632   GUGCUCUCUCUCUUCUGUCAU   652

2.0 Zea mays clone UT1152 SBP transcription factor mRNA, partial cds NA coding protein psRNATarget
KJ726820.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:812   GUGCUCUCUCUCUUCUGUCAA   832

2.0 Zea mays clone pUT3359 SBP transcription factor (SBP8) mRNA, partial cds NA coding protein psRNATarget
AJ011619.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:559   GUGCUCUCUCUCUUCUGUCAA   579

2.0 Zea mays mRNA for SBP-domain protein 6, partial NA coding protein psRNATarget
EU970791.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:587   GUGCUCUCUCUCUUCUGUCAU   607

2.0 Zea mays clone 350913 mRNA sequence NA coding protein psRNATarget
BT064694.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:895   GUGCUCUCUCUCUUCUGUCAU   915

2.0 Zea mays full-length cDNA clone ZM_BFb0036O07 mRNA, complete cds NA coding protein psRNATarget
AJ011618.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:595   GUGCUCUCUCUCUUCUGUCAA   615

2.0 Zea mays mRNA for SBP-domain protein 5, partial NA coding protein psRNATarget
XM_008678828.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:877   GUGCUCUCUCUCUUCUGUCAU   897

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100278824), transcript variant X3, mRNA NA coding protein psRNATarget
NM_001151973.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:955   GUGCUCUCUCUCUUCUGUCAU   975

2.0 Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100278824), mRNA NA coding protein psRNATarget
EU975549.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:955   GUGCUCUCUCUCUUCUGUCAU   975

2.0 Zea mays clone 492287 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008678827.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:901   GUGCUCUCUCUCUUCUGUCAU   921

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100278824), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001318379.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:741   GUGCUCUCUCUCUUCUGUCAU   761

2.0 Zea mays Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100279436), mRNA NA coding protein psRNATarget
KJ727943.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1124   GUGCUCUCUCUCUUCUGUCAA   1144

2.0 Zea mays clone pUT6039 SBP transcription factor (SBP20) mRNA, partial cds NA coding protein psRNATarget
BT087508.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*||||||||||||||
targets:815   AUGCUCUCUCUCUUCUGUCAG   835

1.0 Zea mays full-length cDNA clone ZM_BFb0098L17 mRNA, complete cds NA coding protein psRNATarget
BT033415.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*||||||||||||||
targets:840   AUGCUCUCUCUCUUCUGUCAG   860

1.0 Zea mays full-length cDNA clone ZM_BFb0223G18 mRNA, complete cds NA coding protein psRNATarget
NM_001136780.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*||||||||||||||
targets:840   AUGCUCUCUCUCUUCUGUCAG   860

1.0 Zea mays SBP transcription factor (SBP12), mRNA NA coding protein psRNATarget
XM_008678826.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:935   GUGCUCUCUCUCUUCUGUCAU   955

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100278824), transcript variant X1, mRNA NA coding protein psRNATarget
EU964656.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:763   GUGCUCUCUCUCUUCUGUCAU   783

2.0 Zea mays clone 280651 mRNA sequence NA coding protein psRNATarget
EU972995.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:918   GUGCUCUCUCUCUUCUGUCAA   938

2.0 Zea mays clone 391427 squamosa promoter-binding-like protein 9 mRNA, complete cds NA coding protein psRNATarget
BT041777.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:929   GUGCUCUCUCUCUUCUGUCAA   949

2.0 Zea mays full-length cDNA clone ZM_BFb0053F21 mRNA, complete cds NA coding protein psRNATarget
BT054238.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:889   GUGCUCUCUCUCUUCUGUCAU   909

2.0 Zea mays full-length cDNA clone ZM_BFb0189E24 mRNA, complete cds NA coding protein psRNATarget
NM_001143473.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:932   GUGCUCUCUCUCUUCUGUCAA   952

2.0 Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (SBP23), mRNA NA coding protein psRNATarget
BT037938.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:932   GUGCUCUCUCUCUUCUGUCAA   952

2.0 Zea mays full-length cDNA clone ZM_BFb0203K20 mRNA, complete cds NA coding protein psRNATarget
NM_001308478.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1055   GUGCUCUCUCUCUUCUGUCAA   1075

2.0 Zea mays squamosa promoter-binding-like protein 17 (LOC542666), mRNA NA coding protein psRNATarget
NM_001301523.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1055   GUGCUCUCUCUCUUCUGUCAA   1075

2.0 Zea mays squamosa promoter-binding-like protein 14 (LOC103654498), mRNA NA coding protein psRNATarget
BT054334.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1055   GUGCUCUCUCUCUUCUGUCAA   1075

2.0 Zea mays full-length cDNA clone ZM_BFb0338P09 mRNA, complete cds NA coding protein psRNATarget
BT039521.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1228   GUGCUCUCUCUCUUCUGUCAA   1248

2.0 Zea mays full-length cDNA clone ZM_BFc0017D10 mRNA, complete cds NA coding protein psRNATarget
BT084089.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1046   GUGCUCUCUCUCUUCUGUCAA   1066

2.0 Zea mays full-length cDNA clone ZM_BFb0073B10 mRNA, complete cds NA coding protein psRNATarget
XM_008645221.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1252   GUGCUCUCUCUCUUCUGUCAA   1272

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100279234), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020553266.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1364   GUGCUCUCUCUCUUCUGUCAA   1384

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100279234), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008645218.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1373   GUGCUCUCUCUCUUCUGUCAA   1393

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100279234), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008679336.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1311   GUGCUCUCUCUCUUCUGUCAA   1331

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (SBP20), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008679338.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1342   GUGCUCUCUCUCUUCUGUCAA   1362

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (SBP20), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008679337.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1363   GUGCUCUCUCUCUUCUGUCAA   1383

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (SBP20), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008681329.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1360   GUGCUCUCUCUCUUCUGUCAA   1380

2.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 14 (LOC103654498), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008681327.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1363   GUGCUCUCUCUCUUCUGUCAA   1383

2.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 14 (LOC103654498), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008681328.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1363   GUGCUCUCUCUCUUCUGUCAA   1383

2.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 14 (LOC103654498), transcript variant X2, mRNA NA coding protein psRNATarget
BT039945.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1526   GUGCUCUCUCUCUUCUGUCAA   1546

2.0 Zea mays full-length cDNA clone ZM_BFc0054D09 mRNA, complete cds NA coding protein psRNATarget
XM_020553268.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1561   GUGCUCUCUCUCUUCUGUCAA   1581

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100279234), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008665371.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1408   GUGCUCUCUCUCUUCUGUCAA   1428

2.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 14 (LOC541996), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008665363.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1411   GUGCUCUCUCUCUUCUGUCAA   1431

2.0 PREDICTED: Zea mays squamosa promoter-binding-like protein 14 (LOC541996), transcript variant X1, mRNA NA coding protein psRNATarget
EU957096.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1374   GUGCUCUCUCUCUUCUGUCAA   1394

2.0 Zea mays clone 1582615 mRNA sequence NA coding protein psRNATarget
NM_001152255.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1687   GUGCUCUCUCUCUUCUGUCAA   1707

2.0 Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100279234), mRNA NA coding protein psRNATarget
BT053864.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1687   GUGCUCUCUCUCUUCUGUCAA   1707

2.0 Zea mays full-length cDNA clone ZM_BFb0339F10 mRNA, complete cds NA coding protein psRNATarget
BT064560.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1576   GUGCUCUCUCUCUUCUGUCAA   1596

2.0 Zea mays full-length cDNA clone ZM_BFc0183C18 mRNA, complete cds NA coding protein psRNATarget
BT053875.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1562   GUGCUCUCUCUCUUCUGUCAU   1582

2.0 Zea mays full-length cDNA clone ZM_BFb0379K14 mRNA, complete cds NA coding protein psRNATarget
NM_001152261.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1562   GUGCUCUCUCUCUUCUGUCAU   1582

2.0 Zea mays Squamosa promoter-binding-like protein 6 (LOC100279240), mRNA NA coding protein psRNATarget
NM_001175227.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1621   GUGCUCUCUCUCUUCUGUCAA   1641

2.0 Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (SBP20), mRNA NA coding protein psRNATarget
BT064536.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1621   GUGCUCUCUCUCUUCUGUCAA   1641

2.0 Zea mays full-length cDNA clone ZM_BFc0178N24 mRNA, complete cds NA coding protein psRNATarget
BT064918.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1613   GUGCUCUCUCUCUUCUGUCAA   1633

2.0 Zea mays full-length cDNA clone ZM_BFc0014E19 mRNA, complete cds NA coding protein psRNATarget
NM_001175355.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1613   GUGCUCUCUCUCUUCUGUCAA   1633

2.0 Zea mays uncharacterized LOC100382631 (LOC100382631), mRNA NA coding protein psRNATarget
XM_020553267.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:2002   GUGCUCUCUCUCUUCUGUCAA   2022

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100279234), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008652792.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1971   GUGCUCUCUCUCUUCUGUCAU   1991

2.0 PREDICTED: Zea mays squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (LOC100217221), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669545.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  ||||||*|||||||||||||*
targets:1845   GUGCUCUCUCUCUUCUGUCAU   1865

2.0 PREDICTED: Zea mays Squamosa promoter-binding-like protein 6 (LOC100279240), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001321489.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*|||||||||||||*
targets:593   AUGCUCUCUCUCUUCUGUCAU   613

2.0 Zea mays uncharacterized LOC107436005 (LOC107436005), mRNA NA coding protein psRNATarget
AY103643.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*|||||||||||||*
targets:317   AUGCUCUCUCUCUUCUGUCAU   337

2.0 Zea mays PCO133434 mRNA sequence NA coding protein psRNATarget
NM_001156764.2
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*|||||||||||||*
targets:724   AUGCUCUCUCUCUUCUGUCAU   744

2.0 Zea mays uncharacterized LOC100283866 (pco133434), mRNA NA coding protein psRNATarget
EU966210.1
ncRNA:21   CACGAGUGAGAGAAGACAGUC   1
  *|||||*|||||||||||||*
targets:725   AUGCUCUCUCUCUUCUGUCAU   745

2.0 Zea mays clone 292600 SBP domain containing protein mRNA, complete cds NA coding protein psRNATarget
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