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BaseInfo

ncRNA ID novel_zma_miR232
Species Zea mays
Class miRNA
Genome position Chr4:92929010-92929086 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR5451004;SRR2089707
Length 24
Mature sequence(if miRNA) 54 - ACUUUCUCUGGACACGUGGUGGCU - 77
Stem-loop(if miRNA) --   UU      -A  C UG UG  -    GA      C
  ACU  CUCUGG  CA G  G  GC UCUG  CCCGCC A
  |||  ||||||  || |  |  || ||||  |||||| U
  UGA  GAGAUC  GU C  U  CG GGAC  GGGUGG G
GC   -U      CG  - GU GU  C    UG      U
Stem-loop sequence ACUUUCUCUGGACACGUGGUGGCUCUGGACCCGCCCAUGUGGUGGGGUCAGGCGCUGUUGCUGGCCUAGAGUAGUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242059.1
ncRNA:24   UCGGUGGUGCACAGGUCUCUUUCA   1
  *|||||||||||||||||||||||
targets:15   UGCCACCACGUGUCCAGAGAAAGU   38

0.0 Sequence 8054 from Patent EP2985353 NA coding protein psRNATarget
HI409929.1
ncRNA:24   UCGGUGGUGCACAGGUCUCUUUCA   1
  *|||||||||||||||||||||||
targets:15   UGCCACCACGUGUCCAGAGAAAGU   38

0.0 Sequence 8054 from Patent EP2074227 NA coding protein psRNATarget
JB170390.1
ncRNA:24   UCGGUGGUGCACAGGUCUCUUUCA   1
  *|||||||||||||||||||||||
targets:15   UGCCACCACGUGUCCAGAGAAAGU   38

0.0 Sequence 8054 from Patent EP2559767 NA coding protein psRNATarget