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BaseInfo

ncRNA ID novel_zma_miR222
Species Zea mays
Class miRNA
Genome position Chr4:141577498-141577548 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089713;SRR2287161;SRR2089705
Length 24
Mature sequence(if miRNA) 28 - UGAUUGAAGAGUAUAAUAGAGCGG - 51
Stem-loop(if miRNA) --    UG  G  U     A     G
  UGAU  AA AG AUAAU GAGCG A
  ||||  || || ||||| |||||
  AUUG  UU UU UAUUG UUCGC G
AG    GU  G  -     A     C
Stem-loop sequence UGAUUGAAGAGUAUAAUAGAGCGGAGCCGCUUAGUUAUUUGUUUGGUUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   GGCGAGAUAAUAUGAGAAGUUAGU   1
  ||||||||||*||||||||||*||
targets:107   CCGCUCUAUUCUACUCUUCAACCA   130

2.5 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget