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BaseInfo

ncRNA ID novel_zma_miR210
Species Zea mays
Class miRNA
Genome position Chr4:197095801-197095851 [-]
Reference genome RefGen_v4
Source SRR2089709
Length 24
Mature sequence(if miRNA) 1 - AGCCUCGCCUCGCUGGGUUGCUCG - 24
Stem-loop(if miRNA) --   U        -   -      G
  GGU GCUCGGCG GGC AGGUUG U
  ||| |||||||| ||| |||||| A
  UCG UGGGUCGC CCG UCCGAC G
GC   U        U   C      G
Stem-loop sequence GGUUGCUCGGCGGGCAGGUUGGUAGGCAGCCUCGCCUCGCUGGGUUGCUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175957.1
ncRNA:24   GCUCGUUGGGUCGCUCCGCUCCGA   1
  *|*||||||==||||||||||||*
targets:490   AGCGCAACCUGGCGAGGCGAGGCC   513

3.0 Zea mays C2H2 zinc finger malformed spikelet (umc1402), mRNA NA coding protein psRNATarget
BT066826.1
ncRNA:24   GCUCGUUGGGUCGCUCCGCUCCGA   1
  *|*||||||==||||||||||||*
targets:490   AGCGCAACCUGGCGAGGCGAGGCC   513

3.0 Zea mays full-length cDNA clone ZM_BFb0076P10 mRNA, complete cds NA coding protein psRNATarget