ncRNA ID | osa-miR1882a |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:18923858-18924016 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 113 - AGAUUGCUUUCAAGGUCAUUUCUU - 136 |
Stem-loop(if miRNA) |
-UC           CCAAUA           U              U        G   AUUCCCAUAAAUU     U   A    UGUUAUCGGUA      UCCUAGAUUGC UUCAAGGUCAUUUC UUAUGGAA CCC             CAGUA CCA A    |||||||||||      ||||||||||| |||||||||||||| |||||||| |||             ||||| |||    AUAGUAGUCGU      AGGAUCUAACG AGGUUCUAGUAAAG AAUACCUU GGG             GUUGU GGU G GCA           ---UUG           U              C        G   ---AUAAAUCUAU     U   A |
Stem-loop sequence | UCUGUUAUCGGUACCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAUGGAAGCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGUUGUAUCUAAAUAGGGGUUCCAUAACGAAAUGAUCUUGGAUGCAAUCUAGGAGUUUGCUGAUGAUAACG |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |