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BaseInfo

ncRNA ID osa-miR1882a
Species Oryza sativa
Class miRNA
Genome position Chr3:18923858-18924016 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 113 - AGAUUGCUUUCAAGGUCAUUUCUU - 136
Stem-loop(if miRNA) -UC           CCAAUA           U              U        G   AUUCCCAUAAAUU     U   A
   UGUUAUCGGUA      UCCUAGAUUGC UUCAAGGUCAUUUC UUAUGGAA CCC             CAGUA CCA A
   |||||||||||      ||||||||||| |||||||||||||| |||||||| |||             ||||| |||
   AUAGUAGUCGU      AGGAUCUAACG AGGUUCUAGUAAAG AAUACCUU GGG             GUUGU GGU G
GCA           ---UUG           U              C        G   ---AUAAAUCUAU     U   A
Stem-loop sequence UCUGUUAUCGGUACCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAUGGAAGCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGUUGUAUCUAAAUAGGGGUUCCAUAACGAAAUGAUCUUGGAUGCAAUCUAGGAGUUUGCUGAUGAUAACG

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).