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BaseInfo

ncRNA ID	novel_zma_miR209
Species	Zea mays
Class	miRNA
Genome position	Chr10:41865021-41865136 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR2089714;SRR2089715;SRR2287159;SRR2287160;SRR2287161;SRR2287162;SRR2287163;SRR2287164;SRR2287165;SRR5451003;SRR5451004;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089707
Length	24
Mature sequence(if miRNA)	1 - AAGGGCGGACUGUCCGCGGCCUAG - 24
Stem-loop(if miRNA)	--AA G            C G        -     G    GC    --U  U     -   C     G GCGGACUGUCCG G CCUAGGGC CGGAC GUCC  GGCC   GG GCAGG AGC U     | |||||||||||| | |||||||| ||||| ||||  ||||   || ||||| |||     C CGCCUGGCAGGC C GGAUCCCG GCCUG CAGG  CCGG   UC CGUCC UUG G CGUG G            - G        C     G    --    CAG  -     C   G
Stem-loop sequence	AAGGGCGGACUGUCCGCGGCCUAGGGCCGGACGGUCCGCGGCCUGGUGCAGGAGCCUGGGUUCCCUGCCUGACGGCCGGACGGUCCGCGCCCUAGGGCCGGACGGUCCGCGCGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT088349.1	ncRNA:24   GA-UCCGGCGCCUGUCAGGCGGGAA   1   ||-||||||||||||||||||||*| targets:1264   CUCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   GA-UCCGGCGCCUGUCAGGCGGGAA   1   ||-||||||||||||||||||||*| targets:1264   CUCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   GAUCCGGCGCCUGUCAGGCGGGAA   1   |*||||||||||||||||||||*| targets:2708   CCAGGCCGCGGACAGUCCGCCCCU   2731 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget