ncRNA ID | novel_zma_miR200 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:25232561-25232664 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089706;SRR2089707;SRR2089708 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AAUAGGAUGUUUCCACUGGCGGUUU - 25 |
Stem-loop(if miRNA) |
--                        U   AACACA           A   U   AAUAGGAUGUUUCCACUGGCGGUU GGU      AACCGCCAGUG AAA U   |||||||||||||||||||||||| |||      ||||||||||| |||   UUAUCCUACAAAGGUGACCGCCAA UCA      UUGGCGGUCAC UUU G CU                        U   AUUCUA           C   A |
Stem-loop sequence | AAUAGGAUGUUUCCACUGGCGGUUUGGUAACACAAACCGCCAGUGAAAAUUGAUUUCCACUGGCGGUUAUCUUAACUUAACCGCCAGUGGAAACAUCCUAUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ101180.1 |
|
1.5 | TSA: Zea mays contig36836, mRNA sequence | NA | coding protein | psRNATarget |