ncRNA ID | osa-miR435 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:18209450-18209581 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 97 - UUAUCCGGUAUUGGAGUUGA - 116 |
Stem-loop(if miRNA) |
U    ----CCU    AAA      CCAGCAG   U   GCG     -  -          GCUUCA   - U  UCCA       UCCC   AACUCC       ACC GGA   AAAAU UG CCUUGAAUUA      GAC C A  ||||       ||||   ||||||       ||| |||   ||||| || ||||||||||      ||| |  AGGU       AGGG   UUGAGG       UGG CCU   UUUUG AC GGGAUUUGAU      CUG G U C    UAAAAGU    -AG      ----UUA   -   --A     U  A          -AGUUG   U A |
Stem-loop sequence | UUCCACCUUCCCAAAAACUCCCCAGCAGACCUGGAGCGAAAAUUGCCUUGAAUUAGCUUCAGACCUAUAGUGUCGUUGAUAGUUUAGGGACAUGUUUUAUCCGGUAUUGGAGUUGAGGGAUGAAAAUUGGAC |
1 | PMID:15805478
"Cloning and characterization of microRNAs from rice"; Sunkar R, Girke T, Jain PK, Zhu JK; Plant Cell. 17:1397-1411(2005). |