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BaseInfo

ncRNA ID osa-miR435
Species Oryza sativa
Class miRNA
Genome position Chr3:18209450-18209581 [+]
Reference genome MSU7
Source miRBase
Length 20
Mature sequence(if miRNA) 97 - UUAUCCGGUAUUGGAGUUGA - 116
Stem-loop(if miRNA) U    ----CCU    AAA      CCAGCAG   U   GCG     -  -          GCUUCA   - U
 UCCA       UCCC   AACUCC       ACC GGA   AAAAU UG CCUUGAAUUA      GAC C A
 ||||       ||||   ||||||       ||| |||   ||||| || ||||||||||      ||| |
 AGGU       AGGG   UUGAGG       UGG CCU   UUUUG AC GGGAUUUGAU      CUG G U
C    UAAAAGU    -AG      ----UUA   -   --A     U  A          -AGUUG   U A
Stem-loop sequence UUCCACCUUCCCAAAAACUCCCCAGCAGACCUGGAGCGAAAAUUGCCUUGAAUUAGCUUCAGACCUAUAGUGUCGUUGAUAGUUUAGGGACAUGUUUUAUCCGGUAUUGGAGUUGAGGGAUGAAAAUUGGAC

Reference

1 PMID:15805478
"Cloning and characterization of microRNAs from rice";
Sunkar R, Girke T, Jain PK, Zhu JK;
Plant Cell. 17:1397-1411(2005).