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BaseInfo

ncRNA ID	novel_zma_miR195
Species	Zea mays
Class	miRNA
Genome position	Chr4:244520651-244520717 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089712;SRR2089713;SRR2089715;SRR2647387;SRR1618883;SRR3385651;SRR4237220;SRR4237221;SRR4237222;SRR4237223;SRR1997865;SRR4237224;SRR4237225;SRR4237226;SRR4237227;SRR5105959;SRR5105961;SRR5105963;SRR5451003;SRR5451004;SRR1997866;SRR2089701
Length	21
Mature sequence(if miRNA)	47 - UCGCUUGGUGCAGAUCGGGAC - 67
Stem-loop(if miRNA)	--             AU     C   CCG    G   UCGCUUGGUGCAG  CGGGA CCG   CCCG C   |||||||||||||  ||||| |||   |||| C   AGUGAACUACGUU  GCCCU GGC   GGGC G UA             CC     A   --A    A
Stem-loop sequence	UCGCUUGGUGCAGAUCGGGACCCGCCGCCCGGCCGACGGGACGGAUCCCGCCUUGCAUCAAGUGAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI408559.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:54   GUCCCGAUCUGCACCAAGCGA   74 Target Full Sequence	0.0	Sequence 6684 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240689.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:54   GUCCCGAUCUGCACCAAGCGA   74 Target Full Sequence	0.0	Sequence 6684 from Patent EP2985353	NA	coding protein	psRNATarget
JB169020.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:54   GUCCCGAUCUGCACCAAGCGA   74 Target Full Sequence	0.0	Sequence 6684 from Patent EP2559767	NA	coding protein	psRNATarget
BT065747.2	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:1320   GUCCCGAUCUGCACCAAGCGA   1340 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0062G24 mRNA, complete cds	NA	coding protein	psRNATarget
BT069329.2	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:1709   GUCCCGAUCUGCACCAAGCGA   1729 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0095L21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176734.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:1709   GUCCCGAUCUGCACCAAGCGA   1729 Target Full Sequence	0.0	Zea mays uncharacterized LOC100384155 (LOC100384155), mRNA	NA	coding protein	psRNATarget
NM_001152323.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:2490   GUCCCGAUCUGCACCAAGCGA   2510 Target Full Sequence	0.0	Zea mays uncharacterized LOC100279302 (LOC100279302), mRNA	NA	coding protein	psRNATarget
BT053999.2	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   ||||||||||||||||||||| targets:2490   GUCCCGAUCUGCACCAAGCGA   2510 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0109O10 mRNA, complete cds	NA	coding protein	psRNATarget
EZ072280.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=|||*||||||||||||* targets:44   AUCUCGACCUGCACCAAGCGC   64 Target Full Sequence	3.0	TSA: Zea mays contig07917, mRNA sequence	NA	coding protein	psRNATarget
DQ245971.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=*||*||||||||||||| targets:559   AUCUAGAACUGCACCAAGCGA   579 Target Full Sequence	3.0	Zea mays clone 93704 mRNA sequence	NA	coding protein	psRNATarget
AY109059.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=*||*||||||||||||| targets:538   AUCUAGAACUGCACCAAGCGA   558 Target Full Sequence	3.0	Zea mays PCO086069 mRNA sequence	NA	coding protein	psRNATarget
EU965581.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=*||*||||||||||||| targets:565   AUCUAGAACUGCACCAAGCGA   585 Target Full Sequence	3.0	Zea mays clone 287128 anaphase-promoting complex subunit 11 mRNA, complete cds	NA	coding protein	psRNATarget
EU976491.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=*||*||||||||||||| targets:570   AUCUAGAACUGCACCAAGCGA   590 Target Full Sequence	3.0	Zea mays clone 896095 anaphase-promoting complex subunit 11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001159149.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=*||*||||||||||||| targets:570   AUCUAGAACUGCACCAAGCGA   590 Target Full Sequence	3.0	Zea mays uncharacterized LOC100286262 (pco086069b), mRNA	NA	coding protein	psRNATarget
NM_001159471.2	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=*||*||||||||||||| targets:592   AUCUAGAACUGCACCAAGCGA   612 Target Full Sequence	3.0	Zea mays anaphase-promoting complex subunit 11 (LOC100283699), mRNA	NA	coding protein	psRNATarget
XM_020552233.1	ncRNA:21   CAGGGCUAGACGUGGUUCGCU   1   *||=*||*||||||||||||| targets:723   AUCUAGAACUGCACCAAGCGA   743 Target Full Sequence	3.0	PREDICTED: Zea mays anaphase-promoting complex subunit 11 (LOC100283699), transcript variant X1, mRNA	NA	coding protein	psRNATarget