ncRNA ID | novel_zma_miR190 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:224972560-224972686 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583943;SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 104 - ACCACUAGUAACCGAACAUGGCCU - 127 |
Stem-loop(if miRNA) |
--   -              G  A   GA           A                      A   GCU UGUUCGGUUGCUAG GG UUG  GGGGAUUGAAG GGAUUAAAUCCCCUCCUAUUCA U   ||| |||||||||||||| || |||  ||||||||||| ||||||||||||||||||||||   CGG ACAAGCCAAUGAUC CC AAC  CCCCUAACUUC CCUAAUUUAGGGGAGGAUAAGU U UC   U              A  A   UC           C                      U |
Stem-loop sequence | GCUUGUUCGGUUGCUAGGGGAUUGGAGGGGAUUGAAGAGGAUUAAAUCCCCUCCUAUUCAAUUUUGAAUAGGAGGGGAUUUAAUCCCCUUCAAUCCCCCUCAAACCACUAGUAACCGAACAUGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ059519.1 |
|
1.0 | TSA: Zea mays contig60641, mRNA sequence | NA | coding protein | psRNATarget |